RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 KLQ9UEF7 1012 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 TMPRSS11EQ9UL52 423 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 RIMKLBQ9ULI2 386 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 SLC17A4Q9Y2C5 497 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 TCAF1Q9Y4C2 921 aa20.33■□□□□ 0.84
HMGA2-211ENST00000545998 OAS3Q9Y6K5 1087 aaKnown RBP20.33■□□□□ 0.84
HMGA2-211ENST00000545998 SPEGQ15772 3267 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 GOLGA8MH3BSY2 632 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 H7C0S8 307 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PCDHGA12O60330 932 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 AVILO75366 819 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 JUNDP17535 347 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 MGAT1P26572 445 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 EPHA8P29322 1005 aaPredicted RBP20.32■□□□□ 0.84
HMGA2-211ENST00000545998 SRP54P61011 504 aaKnown RBP20.32■□□□□ 0.84
HMGA2-211ENST00000545998 CRADDP78560 199 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PPARDQ03181 441 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 BNIP3Q12983 259 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PEX6Q13608 980 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 SKIDA1Q1XH10 827 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 UAP1L1Q3KQV9 507 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PCID2Q5JVF3 399 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 HOOK3Q86VS8 718 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 OR13J1Q8NGT2 312 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 SAP25Q8TEE9 199 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 BTN2A2Q8WVV5 523 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 OR1E3Q8WZA6 343 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 GLYATL1Q969I3 302 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PDXPQ96GD0 296 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 ZNF778Q96MU6 729 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 TCEAL2Q9H3H9 227 aaPredicted RBP20.32■□□□□ 0.84
HMGA2-211ENST00000545998 APPL1Q9UKG1 709 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 PCDHGB2Q9Y5G2 931 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 DGKBQ9Y6T7 804 aa20.32■□□□□ 0.84
HMGA2-211ENST00000545998 CNOT1A5YKK6 2376 aaKnown RBP20.32■□□□□ 0.84
HMGA2-211ENST00000545998 CCDC78A2IDD5 438 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 EFCAB8A8MWE9 144 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 CCL22O00626 93 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 GPR39O43194 453 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A9O60656 530 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 SEC31AO94979 1220 aaKnown RBP20.31■□□□□ 0.84
HMGA2-211ENST00000545998 PRAMEF1O95521 474 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A6P19224 532 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A1P22309 533 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A4P22310 534 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A3P35503 534 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A5P35504 534 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 MAGEA3P43357 314 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 HK3P52790 923 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 HNRNPKP61978 463 aaKnown RBP eCLIP20.31■□□□□ 0.84
HMGA2-211ENST00000545998 ITGA9Q13797 1035 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 TSTD2Q5T7W7 516 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 DBX2Q6ZNG2 339 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 NLRP9Q7RTR0 991 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 KANSL1Q7Z3B3 1105 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 PHACTR4Q8IZ21 702 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 PPHLN1Q8NEY8 458 aaKnown RBP20.31■□□□□ 0.84
HMGA2-211ENST00000545998 SNF8Q96H20 258 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 CDKN2AIPNLQ96HQ2 116 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 ERP44Q9BS26 406 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 TRIM31Q9BZY9 425 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A7Q9HAW7 530 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A10Q9HAW8 530 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 UGT1A8Q9HAW9 530 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 MRPL40Q9NQ50 206 aaKnown RBP20.31■□□□□ 0.84
HMGA2-211ENST00000545998 CHRAC1Q9NRG0 131 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 SYBUQ9NX95 663 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 TMEM98Q9Y2Y6 226 aa20.31■□□□□ 0.84
HMGA2-211ENST00000545998 PRSS38A1L453 326 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 H3BM21 787 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 ZNF500O60304 480 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 SDC3O75056 442 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 PIAS2O75928 621 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 SRP72O76094 671 aaKnown RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 FUCA1P04066 466 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 CD59P13987 128 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 DGKAP23743 735 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 CA5AP35218 305 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 POLD2P49005 469 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 MORF4L2Q15014 288 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 HIBCHQ6NVY1 386 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 DOK6Q6PKX4 331 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 PHYKPLQ8IUZ5 450 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 HID1Q8IV36 788 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 RBFAQ8N0V3 343 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 MNS1Q8NEH6 495 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 ZNF398Q8TD17 642 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 PTCD2Q8WV60 388 aaKnown RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 PEX13Q92968 403 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 SCARF2Q96GP6 870 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 SLC2A6Q9UGQ3 507 aa20.3■□□□□ 0.84
HMGA2-211ENST00000545998 APOBEC3BQ9UH17 382 aaKnown RBP20.3■□□□□ 0.84
HMGA2-211ENST00000545998 TP73O15350 636 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 SLC25A14O95258 325 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 RASGRP1O95267 797 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 RPL21P46778 160 aaKnown RBP20.29■□□□□ 0.84
HMGA2-211ENST00000545998 BLKP51451 505 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ARSDP51689 593 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 ACVR1Q04771 509 aa20.29■□□□□ 0.84
HMGA2-211ENST00000545998 NFATC2Q13469 925 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms