RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MAFKO60675 156 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 MRPS14O60783 128 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 FBXO24O75426 580 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 TRPA1O75762 1119 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CPNE6O95741 557 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 MLYCDO95822 493 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CHEK2O96017 543 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PF4P02776 101 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CYP11A1P05108 521 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 EIF2S1P05198 315 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 FYNP06241 537 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CELA3AP09093 270 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 NCAM1P13591 858 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ACPPP15309 386 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GPX3P22352 226 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ARNTP27540 789 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 HTR1EP28566 365 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CCR1P32246 355 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ETFBP38117 255 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CAPGP40121 348 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 BAG6P46379 1132 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SERPINH1P50454 418 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 HLCSP50747 726 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CCT8P50990 548 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SLC7A2P52569 658 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ACVR1Q04771 509 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CAMK2GQ13555 558 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PEX6Q13608 980 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ITGA7Q13683 1181 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GAS6Q14393 721 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CBX2Q14781 532 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CYTH1Q15438 398 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 MOGQ16653 247 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SMU1Q2TAY7 513 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PDCD4Q53EL6 469 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 RBM48Q5RL73 367 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF678Q5SXM1 525 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CCNYL2Q5T2Q4 361 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SYPL2Q5VXT5 272 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 BTBD8Q5XKL5 378 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 TMEM198Q66K66 360 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ZNF470Q6ECI4 717 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 MRNIPQ6NTE8 343 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GK5Q6ZS86 529 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 JAZF1Q86VZ6 243 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 OSTM1Q86WC4 334 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 METTL23Q86XA0 190 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 DCP1BQ8IZD4 617 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 DHRSXQ8N5I4 330 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 NPWQ8N729 165 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GPRC5AQ8NFJ5 357 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 OR52E4Q8NGH9 312 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 DNAJB8Q8NHS0 232 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SHKBP1Q8TBC3 707 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 TRPM4Q8TD43 1214 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 LRTOMTQ8WZ04 291 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 COPS5Q92905 334 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 USP13Q92995 863 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SLCO4A1Q96BD0 722 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 DCPSQ96C86 337 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ISOC1Q96CN7 298 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ATXN7L3BQ96GX2 97 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PLEKHG4BQ96PX9 1271 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PPP1R10Q96QC0 940 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ACBD6Q9BR61 282 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ADI1Q9BV57 179 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 KATNAL1Q9BW62 490 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 EIF2AQ9BY44 585 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 TKTL2Q9H0I9 626 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GSTO2Q9H4Y5 243 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 CAAP1Q9H8G2 361 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SYTL2Q9HCH5 934 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ADARB2Q9NS39 739 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ABCC13Q9NSE7 274 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 DUS2Q9NX74 493 aaKnown RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SMPD3Q9NY59 655 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 ZIM2Q9NZV7 527 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 GNPTGQ9UJJ9 305 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 LEF1Q9UJU2 399 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-225ENST00000545920 BLOC1S6Q9UL45 172 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 SH3GLB1Q9Y371 365 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 Q9Y3F1 56 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 COMMD10Q9Y6G5 202 aa6.45□□□□□ -1.38
SNHG1-225ENST00000545920 PAPPA2Q9BXP8 1791 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 A0A096LPE4 126 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 A0A0J9YYE9 177 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 RNF103-CHMP3A0A140T963 221 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 A0A1W2PP18 115 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 A0A1W2PPZ6 126 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 MROH6A6NGR9 719 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 SAC3D1A6NKF1 404 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 YJEFN3A6XGL0 299 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 HHLA1C9JL84 531 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 FAM72CH0Y354 149 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 NRP1O14786 923 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 AZIN1O14977 448 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 CLOCKO15516 846 aa6.44□□□□□ -1.38
SNHG1-225ENST00000545920 ZSCAN9O15535 394 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms