RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 TADA1Q96BN2 335 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 ACBD6Q9BR61 282 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 C1QTNF3Q9BXJ4 246 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 ZIM2Q9NZV7 527 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 RIMKLBQ9ULI2 386 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 WDR37Q9Y2I8 494 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 ZNF711Q9Y462 761 aa8.71□□□□□ -1.01
TDP1-204ENST00000545686 FUOMA2VDF0 154 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 ASPDHA6ND91 283 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 TMX2-CTNND1H3BSU7 103 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 ABCB7O75027 752 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 DEAF1O75398 565 aaPredicted RBP8.71□□□□□ -1.02
TDP1-204ENST00000545686 SULT1C4O75897 302 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 CLIC3O95833 236 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 BCL10O95999 233 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 MMP2P08253 660 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 MTHFD1P11586 935 aaKnown RBP8.71□□□□□ -1.02
TDP1-204ENST00000545686 CHRM3P20309 590 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 CD247P20963 164 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 RPL9P32969 192 aaKnown RBP8.71□□□□□ -1.02
TDP1-204ENST00000545686 ZFP36L2P47974 494 aaKnown RBP8.71□□□□□ -1.02
TDP1-204ENST00000545686 BCAP31P51572 246 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 ALDH3A2P51648 485 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 FOXA1P55317 472 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 GABARAPL2P60520 117 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 TIAL1Q01085 375 aaKnown RBP eCLIP8.71□□□□□ -1.02
TDP1-204ENST00000545686 EMX2Q04743 252 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 CLCQ05315 142 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 EPS8Q12929 822 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 OR4D1Q15615 310 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 NEDD8Q15843 81 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 KDELC2Q7Z4H8 507 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 RIMKLAQ8IXN7 391 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 CENPSQ8N2Z9 138 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 OR52K2Q8NGK3 314 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 TANKQ92844 425 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 KIAA1191Q96A73 305 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 C1orf74Q96LT6 269 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 ZFP42Q96MM3 310 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 LRRC3Q9BY71 257 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 NDFIP2Q9NV92 336 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 MARCH4Q9P2E8 410 aaPredicted RBP8.71□□□□□ -1.02
TDP1-204ENST00000545686 ITGB1BP2Q9UKP3 347 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 BLOC1S6Q9UL45 172 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 PCDHGA4Q9Y5G9 962 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 PTGDR2Q9Y5Y4 395 aa8.71□□□□□ -1.02
TDP1-204ENST00000545686 FAM234BA2RU67 622 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CCDC154A6NI56 674 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 STX16O14662 325 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 LDB2O43679 373 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SERPINB7O75635 380 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DNAJB5O75953 348 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CLPXO76031 633 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SIX3O95343 332 aaPredicted RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 GLP2RO95838 553 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CHEK2O96017 543 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 RPS17P08708 135 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 ODC1P11926 461 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CD86P42081 329 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 BAG6P46379 1132 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ARSDP51689 593 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 BMXP51813 675 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ARSFP54793 590 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 BNIP3Q12983 259 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DAG1Q14118 895 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 BTG3Q14201 252 aaPredicted RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 MFSD10Q14728 455 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 PFKFB4Q16877 469 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 EML3Q32P44 896 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SIRPB2Q5JXA9 342 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 MARC1Q5VT66 337 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 NANOGP8Q6NSW7 305 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ZNF549Q6P9A3 640 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DLK2Q6UY11 383 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 LINC00299Q6ZSB3 139 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 HOMEZQ8IX15 550 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 KIAA2013Q8IYS2 634 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 AADATQ8N5Z0 425 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DPP10Q8N608 796 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 TEX26Q8N6G2 289 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 STAG3L4Q8TBR4 150 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 EXT2Q93063 718 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 RTP3Q9BQQ7 232 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 DERL2Q9GZP9 239 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 NOL6Q9H6R4 1146 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 ZFYVE28Q9HCC9 887 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SYTL2Q9HCH5 934 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 NT5MQ9NPB1 228 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 ADARB2Q9NS39 739 aaKnown RBP8.7□□□□□ -1.02
TDP1-204ENST00000545686 GIMAP2Q9UG22 337 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SUN2Q9UH99 717 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 PSME2Q9UL46 239 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 LOC285095A0A1B0GVY8 99 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 C16orf96A6NNT2 1141 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 SYCE1LA8MT33 242 aa8.7□□□□□ -1.02
TDP1-204ENST00000545686 CFAP99D6REC4 459 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms