RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VPS16Q9H269 839 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 ZNF768Q9H5H4 540 aaKnown RBP14.58□□□□□ -0.08
RTN3-214ENST00000545432 STN1Q9H668 368 aaKnown RBP14.58□□□□□ -0.08
RTN3-214ENST00000545432 PADI1Q9ULC6 663 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 PCDHGB7Q9Y5F8 929 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 OAS3Q9Y6K5 1087 aaKnown RBP14.58□□□□□ -0.08
RTN3-214ENST00000545432 CSMD1Q96PZ7 3565 aa14.58□□□□□ -0.08
RTN3-214ENST00000545432 CDC14CA4D256 554 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 EEF2KO00418 725 aaKnown RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 GADD45BO75293 160 aaPredicted RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 CEACAM4O75871 244 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 F3P13726 295 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 SLC2A4P14672 509 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 XRCC1P18887 633 aaPredicted RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 GARSP41250 739 aaKnown RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 ZNF135P52742 658 aaPredicted RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 DNASE1L3Q13609 305 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 INPP5JQ15735 1006 aaPredicted RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 NADK2Q4G0N4 442 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 DENND2CQ68D51 928 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 CYP4V2Q6ZWL3 525 aaPredicted RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 PSTKQ8IV42 348 aaKnown RBP14.57□□□□□ -0.08
RTN3-214ENST00000545432 TP53INP2Q8IXH6 220 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 KLHL6Q8WZ60 621 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 SEC14L1Q92503 715 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 FCRL4Q96PJ5 515 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 WDR24Q96S15 920 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 TWSG1Q9GZX9 223 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 RMI1Q9H9A7 625 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 GPATCH2LQ9NWQ4 482 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 CPNE7Q9UBL6 633 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 AP4E1Q9UPM8 1137 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 POLEQ07864 2286 aa14.57□□□□□ -0.08
RTN3-214ENST00000545432 PIPSLA2A3N6 862 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 TCP11X1B4DZS4 312 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 MAFKO60675 156 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 SPAG6O75602 509 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 DNAJB5O75953 348 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 KIAA0754O94854 1291 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 NDUFA10O95299 355 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 LDLRP01130 860 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 MT-ND3P03897 115 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 ZNF30P17039 623 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 POU3F2P20265 443 aaPredicted RBP14.56□□□□□ -0.08
RTN3-214ENST00000545432 VARSP26640 1264 aaKnown RBP14.56□□□□□ -0.08
RTN3-214ENST00000545432 COL8A1P27658 744 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 NOP2P46087 812 aaKnown RBP14.56□□□□□ -0.08
RTN3-214ENST00000545432 GFERP55789 205 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 UGT8Q16880 541 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 USP45Q70EL2 814 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 MARK2Q7KZI7 788 aaKnown RBP14.56□□□□□ -0.08
RTN3-214ENST00000545432 TRIM74Q86UV6 250 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 PAF1Q8N7H5 531 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 Q8NA96 180 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 MCEEQ96PE7 176 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 KCTD15Q96SI1 283 aaPredicted RBP14.56□□□□□ -0.08
RTN3-214ENST00000545432 BRD8Q9H0E9 1235 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 LHX9Q9NQ69 397 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 EPHA6Q9UF33 1036 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 CELSR2Q9HCU4 2923 aa14.56□□□□□ -0.08
RTN3-214ENST00000545432 A0A0U1RQS6 177 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 A1L4Q6 167 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 ANKRD62A6NC57 917 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 DFFAO00273 331 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 KATNA1O75449 491 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 PDHA1P08559 390 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 CCNYL3P0C7X3 344 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 STC1P52823 247 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 SH3BP2P78314 561 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 FOXM1Q08050 763 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 DPYSQ14117 519 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 EIF2S3LQ2VIR3 472 aaKnown RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 ARMC12Q5T9G4 340 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 LRRC66Q68CR7 880 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 DNAJC24Q6P3W2 148 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 CHST15Q7LFX5 561 aaPredicted RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 PRSS42Q7Z5A4 293 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 HPS6Q86YV9 775 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 AOPEPQ8N6M6 819 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 PDCD6IPQ8WUM4 868 aaKnown RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 TCTN2Q96GX1 697 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 PLEKHG4BQ96PX9 1271 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 OR6C1Q96RD1 312 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 PEBP4Q96S96 227 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 SNRNP25Q9BV90 132 aaKnown RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 GPR87Q9BY21 358 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 RAB33BQ9H082 229 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 ZMYND15Q9H091 742 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 DHX35Q9H5Z1 703 aaKnown RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 CNOT8Q9UFF9 292 aaKnown RBP14.55□□□□□ -0.08
RTN3-214ENST00000545432 KLHL3Q9UH77 587 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 ZNHIT2Q9UHR6 403 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 CD84Q9UIB8 345 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 ADGRG1Q9Y653 693 aa14.55□□□□□ -0.08
RTN3-214ENST00000545432 A0A0J9YYE9 177 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 EPHB6O15197 1021 aa14.54□□□□□ -0.08
RTN3-214ENST00000545432 TRBC1P01850 177 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms