RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TIAL1Q01085 375 aaKnown RBP eCLIP23.14■■□□□ 1.29
FOXA1-202ENST00000545425 IHHQ14623 411 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 LRIT3Q3SXY7 679 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 CLEC6AQ6EIG7 209 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 PHYKPLQ8IUZ5 450 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 GALNT4Q8N4A0 578 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 FBXO39Q8N4B4 442 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 MFSD2AQ8NA29 543 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 OR52K2Q8NGK3 314 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 PSKH2Q96QS6 385 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 ANKRD60Q9BZ19 345 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 ACTR3BQ9P1U1 418 aa23.14■■□□□ 1.29
FOXA1-202ENST00000545425 GPIP06744 558 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 ALDOCP09972 364 aaKnown RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 GFAPP14136 432 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 OR1G1P47890 313 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 ZNF140P52738 457 aaPredicted RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 CDKL1Q00532 357 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 ELAVL2Q12926 359 aaKnown RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 C6orf52Q5T4I8 152 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 PIM3Q86V86 326 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 SLCO4A1Q96BD0 722 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 RBM38Q9H0Z9 239 aaKnown RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 PCDHAC1Q9H158 963 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 COQ10BQ9H8M1 238 aa23.13■■□□□ 1.29
FOXA1-202ENST00000545425 TUBA8Q9NY65 449 aaPredicted RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 PTBP2Q9UKA9 531 aaKnown RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 CNOT6Q9ULM6 557 aaKnown RBP23.13■■□□□ 1.29
FOXA1-202ENST00000545425 RPS17P08708 135 aaKnown RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 CLCQ05315 142 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 RPS6KA2Q15349 733 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 ZNF280BQ86YH2 543 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 CAMK1DQ8IU85 385 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 FAM156AQ8NDB6 213 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 LRTOMTQ8WZ04 291 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 ELAC1Q9H777 363 aaKnown RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 RNF112Q9ULX5 631 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 SNX13Q9Y5W8 968 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 OAS3Q9Y6K5 1087 aaKnown RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 C2orf81A6NN90 581 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 H7C4K7 107 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 PIP5K1BO14986 540 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 CLASP2O75122 1294 aaKnown RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 RHOBTB1O94844 696 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 PGM3O95394 542 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 H6PDO95479 791 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 SLC4A1P02730 911 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 PRR35P0CG20 571 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 UMPSP11172 480 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 CDH4P55283 916 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 FPGSQ05932 587 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 TAF10Q12962 218 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 GPR17Q13304 367 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 OR4D1Q15615 310 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 GEN1Q17RS7 908 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 AASDHQ4L235 1098 aaPredicted RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 CLLU1OSQ5K130 101 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 OVCA2Q8WZ82 227 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 PRPF18Q99633 342 aaKnown RBP23.12■■□□□ 1.29
FOXA1-202ENST00000545425 MYRFQ9Y2G1 1151 aa23.12■■□□□ 1.29
FOXA1-202ENST00000545425 ZNF23P17027 643 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 PSMA4P25789 261 aaKnown RBP23.11■■□□□ 1.29
FOXA1-202ENST00000545425 ETFBP38117 255 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 CLCN4P51793 760 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 PFKFB4Q16877 469 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 NADK2Q4G0N4 442 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 AARS2Q5JTZ9 985 aaKnown RBP23.11■■□□□ 1.29
FOXA1-202ENST00000545425 BLOC1S3Q6QNY0 202 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 ZBTB49Q6ZSB9 765 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 C3orf30Q96M34 536 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 TTLL2Q9BWV7 592 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 KCTD3Q9Y597 815 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 ARL5AQ9Y689 179 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 CHD5Q8TDI0 1954 aa23.11■■□□□ 1.29
FOXA1-202ENST00000545425 OR51F1A6NGY5 319 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 GOLGA8CPA6NN73 597 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 UBXN8O00124 270 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 NR5A2O00482 541 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 VPS26AO75436 327 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 NDUFS3O75489 264 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 CRCPO75575 148 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 UROSP10746 265 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 FGFR3P22607 806 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 SLC11A2P49281 568 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 TTPAP49638 278 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 GPR15P49685 360 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 GNA12Q03113 381 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 RALGDSQ12967 914 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.1■■□□□ 1.29
FOXA1-202ENST00000545425 RBM44Q6ZP01 1051 aaKnown RBP23.1■■□□□ 1.29
FOXA1-202ENST00000545425 LDB1Q86U70 411 aaPredicted RBP23.1■■□□□ 1.29
FOXA1-202ENST00000545425 MIB1Q86YT6 1006 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 TMEM199Q8N511 208 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 PDZD8Q8NEN9 1154 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 TUBGCP3Q96CW5 907 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 C9orf16Q9BUW7 83 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 CINPQ9BW66 212 aaPredicted RBP23.1■■□□□ 1.29
FOXA1-202ENST00000545425 RIC8BQ9NVN3 520 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 TMEM161AQ9NX61 479 aa23.1■■□□□ 1.29
FOXA1-202ENST00000545425 MAP10Q9P2G4 905 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms