RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 LRIT1Q9P2V4 623 aa16.13■□□□□ 0.17
DDX55-212ENST00000544738 LRRD1A4D1F6 860 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 B4DGG1 531 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 ZW10O43264 779 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 MFAP3LO75121 409 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 MAP3K6O95382 1288 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 PTSQ03393 145 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 SLC10A2Q12908 348 aaPredicted RBP16.12■□□□□ 0.17
DDX55-212ENST00000544738 HLTFQ14527 1009 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX55-212ENST00000544738 PHF19Q5T6S3 580 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 TMEM164Q5U3C3 297 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 NRSN1Q8IZ57 195 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.12■□□□□ 0.17
DDX55-212ENST00000544738 CCL4L1Q8NHW4 92 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 ARRDC2Q8TBH0 407 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.12■□□□□ 0.17
DDX55-212ENST00000544738 RAPGEF5Q92565 580 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 TMEM159Q96B96 161 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 CHP1Q99653 195 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 MAK16Q9BXY0 300 aaKnown RBP16.12■□□□□ 0.17
DDX55-212ENST00000544738 ABCG8Q9H221 673 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 PCDH9Q9HC56 1237 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 TUBD1Q9UJT1 453 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 CHKBQ9Y259 395 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 SLC17A4Q9Y2C5 497 aa16.12■□□□□ 0.17
DDX55-212ENST00000544738 MTA2O94776 668 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 PRLP01236 227 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 JCHAINP01591 159 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 FUCA1P04066 466 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 HLA-DQB2P05538 268 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 IVLP07476 585 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 ZFXP17010 805 aaPredicted RBP16.11■□□□□ 0.17
DDX55-212ENST00000544738 CD82P27701 267 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 SLC1A1P43005 524 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 ZFP36L1Q07352 338 aaKnown RBP16.11■□□□□ 0.17
DDX55-212ENST00000544738 PPIDQ08752 370 aaKnown RBP16.11■□□□□ 0.17
DDX55-212ENST00000544738 PTPRRQ15256 657 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 ODF2Q5BJF6 829 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 ADAMTSL4Q6UY14 1074 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 ATCAYQ86WG3 371 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 IL22RA1Q8N6P7 574 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
DDX55-212ENST00000544738 SCARF2Q96GP6 870 aaPredicted RBP16.11■□□□□ 0.17
DDX55-212ENST00000544738 LYSMD1Q96S90 227 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 CDH19Q9H159 772 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 INTUQ9ULD6 942 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 SUFUQ9UMX1 484 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 SRPK3Q9UPE1 567 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 RNF215Q9Y6U7 377 aa16.11■□□□□ 0.17
DDX55-212ENST00000544738 STMND1H3BQB6 276 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 MTSS1O43312 755 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 GNPDA1P46926 289 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 ATP1A2P50993 1020 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 STC1P52823 247 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 IFI35P80217 286 aaPredicted RBP16.1■□□□□ 0.17
DDX55-212ENST00000544738 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 SLC9A4Q6AI14 798 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 SPRED1Q7Z699 444 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 C17orf82Q86X59 251 aaPredicted RBP16.1■□□□□ 0.17
DDX55-212ENST00000544738 NRROSQ86YC3 692 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 PLD5Q8N7P1 536 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 EXD1Q8NHP7 514 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 ZDHHC1Q8WTX9 485 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 SCAMP4Q969E2 229 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 ADGRE3Q9BY15 652 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 BRD8Q9H0E9 1235 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
DDX55-212ENST00000544738 SPATS2LQ9NUQ6 558 aaKnown RBP16.1■□□□□ 0.17
DDX55-212ENST00000544738 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 DDX56Q9NY93 547 aaKnown RBP16.1■□□□□ 0.17
DDX55-212ENST00000544738 TAAR2Q9P1P5 351 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 CD84Q9UIB8 345 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 HEY1Q9Y5J3 304 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 DOPEY1Q5JWR5 2465 aa16.1■□□□□ 0.17
DDX55-212ENST00000544738 A0A0U1RQS6 177 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 RHPN2P1A8MT19 583 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 ANKRD66B4E2M5 251 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
DDX55-212ENST00000544738 KCNK1O00180 336 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 APOL1O14791 398 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 CLDN7O95471 211 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 SOD1P00441 154 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 FGF1P05230 155 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 CCL4P13236 92 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 ADCY8P40145 1251 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 CTBSQ01459 385 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 BIRC2Q13490 618 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 LRP8Q14114 963 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 IHHQ14623 411 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 PDK1Q15118 436 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 TCEAL1Q15170 157 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 CLPPQ16740 277 aaPredicted RBP16.09■□□□□ 0.17
DDX55-212ENST00000544738 DOK6Q6PKX4 331 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 RHOT1Q8IXI2 618 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 NKD1Q969G9 470 aa16.09■□□□□ 0.17
DDX55-212ENST00000544738 MIB2Q96AX9 1013 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms