RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TUBB3Q13509 450 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 KCNC3Q14003 757 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 PFKFB4Q16877 469 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 C18orf21Q32NC0 220 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 COL13A1Q5TAT6 717 aaPredicted RBP13.6□□□□□ -0.23
HCFC2-202ENST00000544223 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 TMEM198Q66K66 360 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 FRS2Q8WU20 508 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 OSCP1Q8WVF1 389 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 CCDC68Q9H2F9 335 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 TBC1D14Q9P2M4 693 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 DOCK9Q9BZ29 2069 aa13.6□□□□□ -0.23
HCFC2-202ENST00000544223 CAPN8A6NHC0 703 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 UBFD1O14562 309 aaKnown RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 UNC5CO95185 931 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 FGF19O95750 216 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 CISD3P0C7P0 127 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 GRK2P25098 689 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SOX9P48436 509 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 CLEC6AQ6EIG7 209 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 UTP4Q969X6 686 aaKnown RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 FUBP1Q96AE4 644 aaKnown RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 KCNK4Q9NYG8 393 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 ASB1Q9Y576 335 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 PTGDR2Q9Y5Y4 395 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 WASF2Q9Y6W5 498 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 MEI4A8MW99 385 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 TRIM16O95361 564 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 OGNP20774 298 aaKnown RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 WASP42768 502 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 MAGEA9P43362 315 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 AGTR2P50052 363 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 HYAL1Q12794 435 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 NFATC2Q13469 925 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SLC14A2Q15849 920 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 GAB4Q2WGN9 574 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 ATP13A5Q4VNC0 1218 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SH2D4BQ5SQS7 431 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 PHTF2Q8N3S3 785 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 TSPAN17Q96FV3 270 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 SAMD11Q96NU1 681 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 ACOX2Q99424 681 aa13.59□□□□□ -0.23
HCFC2-202ENST00000544223 FBRSL1Q9HCM7 1045 aaKnown RBP13.59□□□□□ -0.23
HCFC2-202ENST00000544223 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.58□□□□□ -0.23
HCFC2-202ENST00000544223 BTN3A1O00481 513 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 CREB5Q02930 508 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 GRIN2CQ14957 1233 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 CFAP157Q5JU67 520 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 PIWIL4Q7Z3Z4 852 aaKnown RBP13.58□□□□□ -0.23
HCFC2-202ENST00000544223 CCDC91Q7Z6B0 441 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 PACS2Q86VP3 889 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 RAB3IL1Q8TBN0 382 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 SMARCD2Q92925 531 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 CDH19Q9H159 772 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 HPS4Q9NQG7 708 aa13.58□□□□□ -0.23
HCFC2-202ENST00000544223 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 CCDC189A1A4V9 331 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 E5RI56 91 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 SUPT7LO94864 414 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 POP4O95707 220 aaKnown RBP13.58□□□□□ -0.24
HCFC2-202ENST00000544223 IL1BP01584 269 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 COL6A2P12110 1019 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
HCFC2-202ENST00000544223 FCARP24071 287 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 ETV3P41162 512 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 PFKPQ01813 784 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 LAMB3Q13751 1172 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 VITQ6UXI7 678 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 RINLQ6ZS11 566 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 CD200R1Q8TD46 325 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 SCG3Q8WXD2 468 aaKnown RBP13.58□□□□□ -0.24
HCFC2-202ENST00000544223 FGF14Q92915 247 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 PEX13Q92968 403 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 SCRN2Q96FV2 425 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 KCNA7Q96RP8 456 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 DRC3Q9H069 523 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 SFXN1Q9H9B4 322 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 TAS2R13Q9NYV9 303 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 COQ6Q9Y2Z9 468 aa13.58□□□□□ -0.24
HCFC2-202ENST00000544223 WDFY4Q6ZS81 3184 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 GRID2O43424 1007 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
HCFC2-202ENST00000544223 TSPAN12O95859 305 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 C1SP09871 688 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 MTHFD2P13995 350 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 TTPAP49638 278 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 CACNG1Q06432 222 aa13.57□□□□□ -0.24
HCFC2-202ENST00000544223 SLC20A2Q08357 652 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms