RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 NUSAP1Q9BXS6 441 aaKnown RBP13.42□□□□□ -0.26
PPME1-208ENST00000543525 IL1RL2Q9HB29 575 aa13.42□□□□□ -0.26
PPME1-208ENST00000543525 PFDN4Q9NQP4 134 aa13.42□□□□□ -0.26
PPME1-208ENST00000543525 SDR39U1Q9NRG7 319 aaPredicted RBP13.42□□□□□ -0.26
PPME1-208ENST00000543525 CCM2LQ9NUG4 571 aaPredicted RBP13.42□□□□□ -0.26
PPME1-208ENST00000543525 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
PPME1-208ENST00000543525 TMCO1Q9UM00 188 aa13.42□□□□□ -0.26
PPME1-208ENST00000543525 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
PPME1-208ENST00000543525 SLC27A5Q9Y2P5 690 aa13.42□□□□□ -0.26
PPME1-208ENST00000543525 ARIH1Q9Y4X5 557 aaPredicted RBP13.42□□□□□ -0.26
PPME1-208ENST00000543525 C2orf81A6NN90 581 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PPP6CO00743 305 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 NME4O00746 187 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 AKAP10O43572 662 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ECI2O75521 394 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TIPRLO75663 272 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CHEK2O96017 543 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 LINC00032P0C843 101 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CKBP12277 381 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CAPN3P20807 821 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 IL10P22301 178 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 FGFR3P22607 806 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 FOXA1P55317 472 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 SMARCB1Q12824 385 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PITRM1Q5JRX3 1037 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 IL31Q6EBC2 164 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TXNDC11Q6PKC3 985 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CARM1Q86X55 608 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PACRGLQ8N7B6 248 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CANT1Q8WVQ1 401 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 RMDN1Q96DB5 314 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 MYEOVQ96EZ4 313 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 MPP4Q96JB8 637 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 KCNA7Q96RP8 456 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TMEM79Q9BSE2 394 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 MUC13Q9H3R2 512 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 POLG2Q9UHN1 485 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PTGDR2Q9Y5Y4 395 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 AK5Q9Y6K8 562 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 STX16O14662 325 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ACSL4O60488 711 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TLR5O60602 858 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 RPS17P08708 135 aaKnown RBP13.41□□□□□ -0.26
PPME1-208ENST00000543525 ZDHHC11BP0C7U3 371 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CES1P23141 567 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 HOXD9P28356 352 aaPredicted RBP13.41□□□□□ -0.26
PPME1-208ENST00000543525 CCND3P30281 292 aaPredicted RBP13.41□□□□□ -0.26
PPME1-208ENST00000543525 MRPL19P49406 292 aaKnown RBP13.41□□□□□ -0.26
PPME1-208ENST00000543525 CDH4P55283 916 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 OXCT1P55809 520 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PRKCQQ04759 706 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 GRIK2Q13002 908 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 MYLK3Q32MK0 819 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TBCELQ5QJ74 424 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 FAM219BQ5XKK7 198 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 LCN8Q6JVE9 175 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 KRT80Q6KB66 452 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 OGFOD2Q6N063 350 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 BLOC1S3Q6QNY0 202 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 GLT6D1Q7Z4J2 308 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 SLC15A3Q8IY34 581 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ALDH16A1Q8IZ83 802 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CFAP52Q8N1V2 620 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 TSPAN14Q8NG11 270 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 OR7D4Q8NG98 312 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 LINC01599Q8WXQ3 324 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PSKH2Q96QS6 385 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CIB1Q99828 191 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 RBM38Q9H0Z9 239 aaKnown RBP13.41□□□□□ -0.26
PPME1-208ENST00000543525 TUBB1Q9H4B7 451 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 PNPLA3Q9NST1 481 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 GIMAP2Q9UG22 337 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 BTRCQ9Y297 605 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 SPO11Q9Y5K1 396 aa13.41□□□□□ -0.26
PPME1-208ENST00000543525 ANKRD36A6QL64 1941 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 A0A0D9SEW6 157 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 DHRS12A0PJE2 317 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 TYW5A2RUC4 315 aaKnown RBP13.4□□□□□ -0.26
PPME1-208ENST00000543525 INSIG1O15503 277 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 HTRA2O43464 458 aaPredicted RBP13.4□□□□□ -0.26
PPME1-208ENST00000543525 KDELR3O43731 214 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 VPS26AO75436 327 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 MLYCDO95822 493 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 PRSS56P0CW18 603 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
PPME1-208ENST00000543525 COL6A1P12109 1028 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 PSMA3P25788 255 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 KCNQ1P51787 676 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
PPME1-208ENST00000543525 GPR17Q13304 367 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms