RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LEXMQ3ZCV2 418 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SYTL3Q4VX76 610 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 AARS2Q5JTZ9 985 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CC2D1BQ5T0F9 858 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 KIAA0895LQ68EN5 471 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 DHRS7BQ6IAN0 325 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TMEM211Q6ICI0 200 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF585AQ6P3V2 769 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 WDR73Q6P4I2 378 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 FBXO46Q6PJ61 603 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 GBP6Q6ZN66 633 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TFAP2DQ7Z6R9 452 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TSPAN33Q86UF1 283 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 NOXA1Q86UR1 476 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TRIM74Q86UV6 250 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TRIM73Q86UV7 250 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 LCA5Q86VQ0 697 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 NLRP14Q86W24 1093 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 MFN1Q8IWA4 741 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 UEVLDQ8IX04 471 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 PALM2Q8IXS6 379 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF276Q8N554 614 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 GJC3Q8NFK1 279 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 OR10S1Q8NGN2 331 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 OR8K5Q8NH50 307 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 RASSF8Q8NHQ8 419 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 HUS1BQ8NHY5 278 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 Q8TCH9 128 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 NEU4Q8WWR8 484 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ASB10Q8WXI3 467 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TAF4BQ92750 862 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ATOH1Q92858 354 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 RRNAD1Q96FB5 475 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 PPP1R13BQ96KQ4 1090 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 HARBI1Q96MB7 349 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ZNF558Q96NG5 402 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 RUNDC3BQ96NL0 473 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 NUDCD1Q96RS6 583 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 GATA5Q9BWX5 397 aaPredicted RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SLCO5A1Q9H2Y9 848 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 HIPK3Q9H422 1215 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SLITRK6Q9H5Y7 841 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKZF1Q9H8Y5 726 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CNOT10Q9H9A5 744 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 MRPL44Q9H9J2 332 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 WDR6Q9NNW5 1121 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 PIH1D3Q9NQM4 214 aaKnown RBP3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 ANKFY1Q9P2R3 1169 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 COPG2Q9UBF2 871 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 IL17BQ9UHF5 180 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 FBXW11Q9UKB1 542 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 TCAF1Q9Y4C2 921 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 CEPT1Q9Y6K0 416 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 MYO5CQ9NQX4 1742 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 SETBP1Q9Y6X0 1596 aa3.97□□□□□ -1.77
SFSWAP-211ENST00000542813 RGS12O14924 1447 aa3.96□□□□□ -1.77
SFSWAP-211ENST00000542813 MST1RQ04912 1400 aa3.96□□□□□ -1.77
SFSWAP-211ENST00000542813 LRP6O75581 1613 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 C1orf226A1L170 272 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PATE3B3GLJ2 98 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ATP2C2O75185 946 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 RTN2O75298 545 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 JRKO75564 520 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 GCATO75600 419 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 RSL1D1O76021 490 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ZWINTO95229 277 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 GBAP04062 536 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HMOX1P09601 288 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 VPREB1P12018 145 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ETFAP13804 333 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 GJA1P17302 382 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 KRT4P19013 534 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 NR4A1P22736 598 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 DNASE1P24855 282 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CASP3P42574 277 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 NT5C2P49902 561 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CLCN5P51795 746 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 GPR143P51810 404 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC12A3P55017 1021 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CYP4F2P78329 520 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SORDQ00796 357 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 R3HDM1Q15032 1099 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PGM5Q15124 567 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PFKFB3Q16875 520 aaPredicted RBP3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HS1BP3Q53T59 392 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HIST2H2BCQ6DN03 193 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HIST2H2BDQ6DRA6 164 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CES5AQ6NT32 575 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 NAPRTQ6XQN6 538 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HAUS6Q7Z4H7 955 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 HAPLN4Q86UW8 402 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ADIPOR2Q86V24 386 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 CCDC25Q86WR0 208 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 KLHL7Q8IXQ5 586 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 SLC35F3Q8IY50 421 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 PEX5LQ8IYB4 626 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 ZBTB2Q8N680 514 aa3.96□□□□□ -1.78
SFSWAP-211ENST00000542813 FAM47BQ8NA70 645 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms