RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 NDUFS3O75489 264 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RNASEH2AO75792 299 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SIX3O95343 332 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 F11P03951 625 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PIRTP0C851 137 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PABPC4LP0CB38 370 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PRR35P0CG20 571 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 HSPA8P11142 646 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 LBPP18428 481 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TSPAN8P19075 237 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 LPOP22079 712 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SLC7A1P30825 629 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MSX2P35548 267 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PEX19P40855 299 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TTPAP49638 278 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CLCN4P51793 760 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ADARP55265 1226 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CDH13P55290 713 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RPS24P62847 133 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CREB5Q02930 508 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CLCQ05315 142 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 GRIK2Q13002 908 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF177Q13360 481 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CYTH1Q15438 398 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AARS2Q5JTZ9 985 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 C6orf10Q5SRN2 563 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ANKS6Q68DC2 871 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PAQR3Q6TCH7 311 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TMEM173Q86WV6 379 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AHI1Q8N157 1196 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MIER2Q8N344 545 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RYBPQ8N488 228 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 GOLM1Q8NBJ4 401 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 FAM156AQ8NDB6 213 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MDGA1Q8NFP4 955 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 OR4K2Q8NGD2 314 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF483Q8TF39 744 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RMDN1Q96DB5 314 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MYRFLQ96LU7 910 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CFHR5Q9BXR6 569 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ADGRE3Q9BY15 652 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 NACA2Q9H009 215 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SDR39U1Q9NRG7 319 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TMEM45AQ9NWC5 275 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 NDUFA13Q9P0J0 144 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AP4S1Q9Y587 144 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AP4B1Q9Y6B7 739 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SMIM31A0A1B0GVY4 71 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ATP6AP2A0A1C7CYW4 349 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SUPT3HB4E1H0 165 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 COCHO43405 550 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 VPS26AO75436 327 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SUPT3HO75486 399 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ECI2O75521 394 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ATP6AP2O75787 350 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 STC2O76061 302 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 GJB5O95377 273 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MLYCDO95822 493 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 LATS1O95835 1130 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 S100BP04271 92 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SMIM18P0DKX4 95 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PKMP14618 531 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 IDO1P14902 403 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 HDCP19113 662 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 EEF1DP29692 281 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CORO1AP31146 461 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SCNN1BP51168 640 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 KIF19Q2TAC6 998 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 USP41Q3LFD5 358 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 IL23RQ5VWK5 629 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CXorf57Q6NSI4 855 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SLC30A9Q6PML9 568 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 PRSS55Q6UWB4 352 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RNF168Q8IYW5 571 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 GALNT15Q8N3T1 639 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 MINDY1Q8N5J2 469 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 OR9I1Q8NGQ6 314 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 BCL7CQ8WUZ0 217 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 NCSTNQ92542 709 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 KCNJ9Q92806 393 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ATP6V1E2Q96A05 226 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 FUBP1Q96AE4 644 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF512Q96ME7 567 aaPredicted RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 BIRC8Q96P09 236 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 EFHD1Q9BUP0 239 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 TUBB1Q9H4B7 451 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ZNF696Q9H7X3 374 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 FBRSL1Q9HCM7 1045 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 HCSTQ9UBK5 93 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AFF4Q9UHB7 1163 aaKnown RBP6.51□□□□□ -1.37
PTPRO-208ENST00000542557 POLG2Q9UHN1 485 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 STOML2Q9UJZ1 356 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 RAI2Q9Y5P3 530 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 ACTL7AQ9Y615 435 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 CEP350Q5VT06 3117 aa6.51□□□□□ -1.37
PTPRO-208ENST00000542557 AQP12BA6NM10 295 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms