RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 ITGA9Q13797 1035 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 PYCR3Q53H96 274 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 C6orf132Q5T0Z8 1188 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 SLCO6A1Q86UG4 719 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 OR6C4Q8NGE1 309 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 MAGOHBQ96A72 148 aaKnown RBP13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 PDXPQ96GD0 296 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 GSDMCQ9BYG8 508 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 SMOXQ9NWM0 555 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 RNF14Q9UBS8 474 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFSF13B-206ENST00000542136 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 CTAGE9A4FU28 777 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 AGAP14A8MT82 685 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 E7EVH7 732 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 H7C0S8 307 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 CHUKO15111 745 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 FFAR2O15552 330 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 LDB2O43679 373 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 DNAJC6O75061 913 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 USP12O75317 370 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 FNTAP49354 379 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 ACADVLP49748 655 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 CLCNKAP51800 687 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 LDLRAP1Q5SW96 308 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 PHYKPLQ8IUZ5 450 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 PEX13Q92968 403 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 NAT6Q93015 286 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 MS4A14Q96JA4 679 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 NAPGQ99747 312 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 TMEM168Q9H0V1 697 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 CARS2Q9HA77 564 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 MRPL40Q9NQ50 206 aaKnown RBP13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 SUFUQ9UMX1 484 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 DOLKQ9UPQ8 538 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 ARL5AQ9Y689 179 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 SAR1BQ9Y6B6 198 aa13.65□□□□□ -0.22
TNFSF13B-206ENST00000542136 SCN8AQ9UQD0 1980 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 LY6G6EA0A0G2JKS1 128 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 GLYATL1P3A0A0U1RQE8 302 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 EME2A4GXA9 379 aaPredicted RBP13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 MROH6A6NGR9 719 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 NUAK1O60285 661 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 KCNJ13O60928 360 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 RFPL3O75679 317 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 APRTP07741 180 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 COILP38432 576 aaPredicted RBP13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 ADCY8P40145 1251 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 MAGEA6P43360 314 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 KCNJ1P48048 391 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 POLD2P49005 469 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 C1orf61Q13536 156 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 SPARCL1Q14515 664 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 DEFB133Q30KQ1 61 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 GPR33Q49SQ1 333 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 ATP13A5Q4VNC0 1218 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 KCTD16Q68DU8 428 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 CCDC137Q6PK04 289 aaKnown RBP13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 NLRP9Q7RTR0 991 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 TAF8Q7Z7C8 310 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 DDHD1Q8NEL9 900 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 OR4K2Q8NGD2 314 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 GRK7Q8WTQ7 553 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 SLCO2A1Q92959 643 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 OR2M4Q96R27 311 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 RANBP9Q96S59 729 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 APOL2Q9BQE5 337 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 BPIFA1Q9NP55 256 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 CASS4Q9NQ75 786 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 NLE1Q9NVX2 485 aaPredicted RBP13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 TMEM98Q9Y2Y6 226 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 NEU2Q9Y3R4 380 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 U3KQA8 63 aa13.64□□□□□ -0.23
TNFSF13B-206ENST00000542136 KLHL33A6NCF5 533 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 GAPDHSO14556 408 aaPredicted RBP13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 INPP4BO15327 924 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 PHF2O75151 1096 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 ASMTLO95671 621 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 ETS1P14921 441 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 PNLIPP16233 465 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 GNPDA1P46926 289 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 LMAN1P49257 510 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 ZNF140P52738 457 aaPredicted RBP13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 DAB2P98082 770 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 XIAPP98170 497 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 OLIG2Q13516 323 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 NR0B2Q15466 257 aa13.63□□□□□ -0.23
TNFSF13B-206ENST00000542136 SMAD1Q15797 465 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms