RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 HIPK3Q9H422 1215 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 NMRK2Q9NPI5 230 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 INTS7Q9NVH2 962 aaKnown RBP15.26■□□□□ 0.03
CNOT9-208ENST00000542068 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 MYO7AQ13402 2215 aa15.26■□□□□ 0.03
CNOT9-208ENST00000542068 HAS3O00219 553 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CCNCP24863 283 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 OR1E1P30953 314 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CA8P35219 290 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 POLR2IP36954 125 aaKnown RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 UFM1P61960 85 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 PAGE3Q5JUK9 113 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 FAM171A1Q5VUB5 890 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 MFSD14CQ5VZR4 134 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 KIAA0930Q6ICG6 404 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 FAM45BPQ6NSW5 357 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 GALNT18Q6P9A2 607 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ABRAXAS1Q6UWZ7 409 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CNTN4Q8IWV2 1026 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 EFHBQ8N7U6 833 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 FAM45AQ8TCE6 357 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CENPNQ96H22 339 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CCDC90BQ9GZT6 254 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 HCSTQ9UBK5 93 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 GIT1Q9Y2X7 761 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ZFC3H1O60293 1989 aaKnown RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CAPNS1P04632 268 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 EEF1DP29692 281 aaKnown RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 RPS9P46781 194 aaKnown RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TUBA4AP68366 448 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TNK2Q07912 1038 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TUSC3Q13454 348 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ZNF235Q14590 738 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 POLD3Q15054 466 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ACAP2Q15057 778 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 PYCR3Q53H96 274 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 RANBP10Q6VN20 620 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 STK32CQ86UX6 486 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 DDHD1Q8NEL9 900 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 OR13C4Q8NGS5 318 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TSPAN17Q96FV3 270 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 PPM1MQ96MI6 270 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 MUS81Q96NY9 551 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CDK15Q96Q40 435 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ZIC5Q96T25 663 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TUBB1Q9H4B7 451 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 ALG2Q9H553 416 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 VPS45Q9NRW7 570 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 OSER1Q9NX31 292 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 PKD2L2Q9NZM6 624 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TOR1BO14657 336 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 IRF1P10914 325 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 IL7RP16871 459 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 MATN1P21941 496 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 HCAR3P49019 387 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 AGTR2P50052 363 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CTXN3Q4LDR2 81 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CST9Q5W186 159 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 RAB44Q7Z6P3 723 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 CILP2Q8IUL8 1156 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 SLC22A9Q8IVM8 553 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TNIP2Q8NFZ5 429 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 OR13J1Q8NGT2 312 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 PLEKHA8Q96JA3 519 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 SMIM14Q96QK8 99 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 SEMA3CQ99985 751 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 AGPAT4Q9NRZ5 378 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 TRNAU1APQ9NX07 287 aaKnown RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 IFT80Q9P2H3 777 aaPredicted RBP15.25■□□□□ 0.03
CNOT9-208ENST00000542068 POLG2Q9UHN1 485 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 SH3GLB1Q9Y371 365 aa15.25■□□□□ 0.03
CNOT9-208ENST00000542068 K7EPI3 171 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 FXYD1O00168 92 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 AP3B1O00203 1094 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 RSL1D1O76021 490 aaKnown RBP15.24■□□□□ 0.03
CNOT9-208ENST00000542068 NFKBIAP25963 317 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 CLCN5P51795 746 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 KCNK10P57789 538 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 ANKRD34AQ69YU3 496 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 TOP1MTQ969P6 601 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 FAIMQ9NVQ4 179 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 SMPD3Q9NY59 655 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-208ENST00000542068 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 ALBP02768 609 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 MYF6P23409 242 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 FMO4P31512 558 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 LSM3P62310 102 aaKnown RBP15.24■□□□□ 0.03
CNOT9-208ENST00000542068 CD300CQ08708 224 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 LAPTM5Q13571 262 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 NR1D2Q14995 579 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 RBBP7Q16576 425 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 PERM1Q5SV97 790 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 DNAJC14Q6Y2X3 702 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-208ENST00000542068 SCD5Q86SK9 330 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 RNF168Q8IYW5 571 aaPredicted RBP15.24■□□□□ 0.03
CNOT9-208ENST00000542068 LZICQ8WZA0 190 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 TRIB2Q92519 343 aa15.24■□□□□ 0.03
CNOT9-208ENST00000542068 SEPT8Q92599 483 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms