RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CLEC20AQ6ZU45 233 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 GAS2L3Q86XJ1 694 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF276Q8N554 614 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 SLC4A11Q8NBS3 891 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ANKRD20A12PQ8NF67 263 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PRSS33Q8NF86 280 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 SCAMP5Q8TAC9 235 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 POC1BQ8TC44 478 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CCT6BQ92526 530 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 MUL1Q969V5 352 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CLDN23Q96B33 292 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 OTUB2Q96DC9 234 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RSPRY1Q96DX4 576 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 RNF31Q96EP0 1072 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ZFYVE19Q96K21 471 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CNOT6LQ96LI5 555 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 TWNKQ96RR1 684 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 EBF3Q9H4W6 596 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ECT2Q9H8V3 914 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 LRRC4Q9HBW1 653 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 HEYLQ9NQ87 328 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 TM7SF3Q9NS93 570 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PARPBPQ9NWS1 579 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 GTSE1Q9NYZ3 720 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 HMGXB4Q9UGU5 601 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 ST6GALNAC2Q9UJ37 374 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 KCNE5Q9UJ90 142 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 MID2Q9UJV3 735 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 LSM7Q9UK45 103 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 FBXO4Q9UKT5 387 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 NDRG2Q9UN36 371 aaKnown RBP5.57□□□□□ -1.52
CPSF7-220ENST00000541963 SCML2Q9UQR0 700 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 MAN2B2Q9Y2E5 1009 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 CPQQ9Y646 472 aa5.57□□□□□ -1.52
CPSF7-220ENST00000541963 PTPRDP23468 1912 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GREB1Q4ZG55 1949 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GTPBP10A4D1E9 387 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 AQP7P3A6NL99 342 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CLCA1A8K7I4 914 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 F5H697 171 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 PES1O00541 588 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TRDMT1O14717 391 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 XPO1O14980 1071 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 MUSKO15146 869 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CCP110O43303 1012 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 COCHO43405 550 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 RGS10O43665 173 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TLR5O60602 858 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 BEST1O76090 585 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 OLFM2O95897 454 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 OAS1P00973 400 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ZDHHC11BP0C7U3 371 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CHRNB1P11230 501 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 RARGP13631 454 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 KRT5P13647 590 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 BTF3P20290 206 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CXCL12P48061 93 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 PPM1FP49593 454 aaPredicted RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CCR3P51677 355 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 SNX16P57768 344 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 LOXL3P58215 753 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 COG7P83436 770 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GAD2Q05329 585 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 BST2Q10589 180 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 PON2Q15165 354 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ELF2Q15723 593 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF77Q15935 545 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 EXOC3L4Q17RC7 722 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 MPEG1Q2M385 716 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GOLGA7BQ2TAP0 167 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF528Q3MIS6 628 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 FBXO43Q4G163 708 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 METRNLQ641Q3 311 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 LCLAT1Q6UWP7 414 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 RRAGAQ7L523 313 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CCDC186Q7Z3E2 898 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TMPRSS6Q8IU80 811 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TMEM132CQ8N3T6 1108 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ANKRD42Q8N9B4 389 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ZMIZ2Q8NF64 920 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ATRIPQ8WXE1 791 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GOLGA1Q92805 767 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 SLC22A12Q96S37 553 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 P2RY13Q9BPV8 354 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 MESP1Q9BRJ9 268 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 DCLK3Q9C098 648 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 NAT10Q9H0A0 1025 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 INTS2Q9H0H0 1204 aaKnown RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 GALNT9Q9HCQ5 603 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 UBE2TQ9NPD8 197 aaPredicted RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ANO10Q9NW15 660 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 SMPD4Q9NXE4 827 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CLIC5Q9NZA1 410 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 DLGAP2Q9P1A6 1054 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TSPAN16Q9UKR8 245 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 CCL26Q9Y258 94 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 ZNF510Q9Y2H8 683 aa5.56□□□□□ -1.52
CPSF7-220ENST00000541963 MTF2Q9Y483 593 aaPredicted RBP5.56□□□□□ -1.52
CPSF7-220ENST00000541963 TTC28Q96AY4 2481 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms