RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CLDN7O95471 211 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 S1PR4O95977 384 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 ITGB7P26010 798 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 DRD3P35462 400 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 PDE1CQ14123 709 aaPredicted RBP27.66■■■□□ 2.02
CCM2-218ENST00000541586 SEMA3AQ14563 771 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 FRMD1Q8N878 549 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 GDAP1Q8TB36 358 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 DYDC1Q8WWB3 177 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 ITM2CQ9NQX7 267 aa27.66■■■□□ 2.02
CCM2-218ENST00000541586 A8MX80 341 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 H7C0S8 307 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 ASMTLO95671 621 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 PRSS56P0CW18 603 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 XPAP23025 273 aaPredicted RBP27.65■■■□□ 2.02
CCM2-218ENST00000541586 P2RY2P41231 377 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 POLR2LP62875 67 aaKnown RBP27.65■■■□□ 2.02
CCM2-218ENST00000541586 CRTC1Q6UUV9 634 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 ERN2Q76MJ5 926 aaKnown RBP27.65■■■□□ 2.02
CCM2-218ENST00000541586 TSPAN33Q86UF1 283 aa27.65■■■□□ 2.02
CCM2-218ENST00000541586 SEMG2Q02383 582 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 PEX6Q13608 980 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 FASTKD1Q53R41 847 aaKnown RBP27.64■■■□□ 2.02
CCM2-218ENST00000541586 PPM1JQ5JR12 505 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 TAX1BP1Q86VP1 789 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 FAM160A2Q8N612 972 aaPredicted RBP27.64■■■□□ 2.02
CCM2-218ENST00000541586 PAIP2Q9BPZ3 127 aaKnown RBP27.64■■■□□ 2.02
CCM2-218ENST00000541586 IQCGQ9H095 443 aaKnown RBP27.64■■■□□ 2.02
CCM2-218ENST00000541586 FBXO4Q9UKT5 387 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 USP34Q70CQ2 3546 aa27.64■■■□□ 2.02
CCM2-218ENST00000541586 FAM95CA0A1B0GW59 222 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 TSPAN11A1L157 253 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 TIMP2P16035 220 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 OGNP20774 298 aaKnown RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 MC4RP32245 332 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 FOXN2P32314 431 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 CRHR1P34998 444 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 CCT5P48643 541 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 SFSWAPQ12872 951 aaKnown RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 USP10Q14694 798 aaKnown RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 SEPT7Q16181 437 aaKnown RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 LVRNQ6Q4G3 990 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 SDCCAG8Q86SQ7 713 aaPredicted RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 OR14C36Q8NHC7 312 aa27.64■■■□□ 2.01
CCM2-218ENST00000541586 FNDC3AQ9Y2H6 1198 aaKnown RBP27.64■■■□□ 2.01
CCM2-218ENST00000541586 ZNF217O75362 1048 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 TOP3BO95985 862 aaKnown RBP27.63■■■□□ 2.01
CCM2-218ENST00000541586 TDGF1P13385 188 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 ADRB3P13945 408 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 SAT1P21673 171 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 POLD2P49005 469 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 XIAPP98170 497 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 SLC41A1Q8IVJ1 513 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 GPATCH11Q8N954 259 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 C19orf43Q9BQ61 176 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 HDAC8Q9BY41 377 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 CCDC134Q9H6E4 229 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 USP36Q9P275 1121 aaKnown RBP27.63■■■□□ 2.01
CCM2-218ENST00000541586 DKK3Q9UBP4 350 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 PLLPQ9Y342 182 aa27.63■■■□□ 2.01
CCM2-218ENST00000541586 GALR2O43603 387 aaPredicted RBP27.62■■■□□ 2.01
CCM2-218ENST00000541586 HOXA6P31267 233 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 CSRP3P50461 194 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 STC1P52823 247 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 CCDC15Q0P6D6 951 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 TYSND1Q2T9J0 566 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 USP39Q53GS9 565 aaKnown RBP27.62■■■□□ 2.01
CCM2-218ENST00000541586 HHATQ5VTY9 493 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 LRRC66Q68CR7 880 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 USP30Q70CQ3 517 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 KBTBD6Q86V97 674 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 CKAP2Q8WWK9 683 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 ELMO2Q96JJ3 720 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 FAM111AQ96PZ2 611 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 VPS11Q9H270 941 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.62■■■□□ 2.01
CCM2-218ENST00000541586 B4GALT6Q9UBX8 382 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 GRID1Q9ULK0 1009 aa27.62■■■□□ 2.01
CCM2-218ENST00000541586 PRR23AA6NEV1 266 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 MPOP05164 745 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 LHCGRP22888 699 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 PMLP29590 882 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 ETV4P43268 484 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 IL9RQ01113 521 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 RBM20Q5T481 1227 aaKnown RBP27.61■■■□□ 2.01
CCM2-218ENST00000541586 PIP5KL1Q5T9C9 394 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 AGBL4Q5VU57 503 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 HCAR2Q8TDS4 363 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 BTBD1Q9H0C5 482 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 A0A096LPK6 155 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 NEMP1O14524 444 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 C2P06681 752 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 SP9P0CG40 484 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 ACSL1P33121 698 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 GMPRP36959 345 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 CDKN1CP49918 316 aaPredicted RBP27.61■■■□□ 2.01
CCM2-218ENST00000541586 SEC24CP53992 1094 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 LONP2Q86WA8 852 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 TOE1Q96GM8 510 aaKnown RBP27.61■■■□□ 2.01
CCM2-218ENST00000541586 CABS1Q96KC9 395 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms