RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 C1QTNF5Q9BXJ0 243 aa3.48□□□□□ -1.85
MDM2-227ENST00000540709 PRKRIP1Q9H875 184 aaPredicted RBP3.48□□□□□ -1.85
MDM2-227ENST00000540709 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.48□□□□□ -1.85
MDM2-227ENST00000540709 PADI3Q9ULW8 664 aa3.48□□□□□ -1.85
MDM2-227ENST00000540709 DLGAP4Q9Y2H0 992 aa3.48□□□□□ -1.85
MDM2-227ENST00000540709 KCNK7Q9Y2U2 307 aa3.48□□□□□ -1.85
MDM2-227ENST00000540709 GREB1LQ9C091 1923 aaPredicted RBP3.48□□□□□ -1.85
MDM2-227ENST00000540709 C1orf226A1L170 272 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 EIF3DO15371 548 aaKnown RBP eCLIP3.47□□□□□ -1.85
MDM2-227ENST00000540709 HOXC11O43248 304 aaPredicted RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 CIDEAO60543 219 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 HOXB5P09067 269 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 FAM106CPP0CH98 169 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ZNF182P17025 639 aaPredicted RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 NR2F2P24468 414 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 PIP4K2AP48426 406 aaPredicted RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 VEGFCP49767 419 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 FRG1Q14331 258 aaKnown RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 BAK1Q16611 211 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ZNF876PQ49A33 203 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 FRG2Q64ET8 278 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 C18orf63Q68DL7 685 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 DPPA4Q7L190 304 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 CACNA2D4Q7Z3S7 1137 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 STPG4Q8N801 248 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ZNF485Q8NCK3 441 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ST8SIA4Q92187 359 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 TM9SF4Q92544 642 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 IGSF8Q969P0 613 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ZNF524Q96C55 264 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 ACOX2Q99424 681 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 TFB2MQ9H5Q4 396 aaKnown RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 ASAH2Q9NR71 780 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 HCFC1R1Q9NWW0 138 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 LUZP4Q9P127 313 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 MARCH4Q9P2E8 410 aaPredicted RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 POLG2Q9UHN1 485 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 INTS6Q9UL03 887 aaKnown RBP3.47□□□□□ -1.85
MDM2-227ENST00000540709 JRKLQ9Y4A0 524 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 CYP46A1Q9Y6A2 500 aa3.47□□□□□ -1.85
MDM2-227ENST00000540709 IGKV3D-15A0A087WSY6 115 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 CCDC196A0A1B0GTZ2 297 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 SYNGR3O43761 229 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 KCNK5O95279 499 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 TUBBP07437 444 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 KRT19P08727 400 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 NR1D1P20393 614 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 CHRNB4P30926 498 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 MMP14P50281 582 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 NR0B1P51843 470 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 RARSP54136 660 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 EIF3BP55884 814 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 CLDN20P56880 219 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 TUBB4BP68371 445 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 PMP22Q01453 160 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 TBX2Q13207 712 aaPredicted RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 MAD2L1Q13257 205 aaPredicted RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 ZRSR2Q15696 482 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 CCDC6Q16204 474 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 TMEM30BQ3MIR4 351 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 HEATR4Q86WZ0 1026 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 CPXCR1Q8N123 301 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 ESX1Q8N693 406 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 KLHDC9Q8NEP7 349 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 UTP15Q8TED0 518 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 PSPC1Q8WXF1 523 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 TAAR8Q969N4 342 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 RRNAD1Q96FB5 475 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 RBM4Q9BWF3 364 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 EGLN1Q9GZT9 426 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 BICC1Q9H694 974 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 TCP11L1Q9NUJ3 509 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 INTS10Q9NVR2 710 aaKnown RBP3.46□□□□□ -1.86
MDM2-227ENST00000540709 CAPN7Q9Y6W3 813 aa3.46□□□□□ -1.86
MDM2-227ENST00000540709 ZCWPW2A0A1B0GU75 182 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 SMIM1B2RUZ4 78 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 H3BQ06 376 aaPredicted RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 M0QZ24 198 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 TAF4O00268 1085 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 ANKRD28O15084 1053 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 TNFSF14O43557 240 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 PCDH7O60245 1069 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 MLYCDO95822 493 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 F9P00740 461 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 IGHV4-39P01824 125 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 ZNF883P0CG24 379 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 ARCN1P48444 511 aaKnown RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 TAF6P49848 677 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 TUBP50607 506 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 RPL24P83731 157 aaKnown RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 PTP4A2Q12974 167 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 DECR1Q16698 335 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 MYLK3Q32MK0 819 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 CCNYL2Q5T2Q4 361 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 CDC73Q6P1J9 531 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 ZNF704Q6ZNC4 412 aaPredicted RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 MYRIPQ8NFW9 859 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 NFKBIDQ8NI38 313 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 FAM76AQ8TAV0 307 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 DNAAF4Q8WXU2 420 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms