RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, human

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561A3-215	ENST00000540317	GPATCH11	Q8N954	259 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	FAM45A	Q8TCE6	357 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	BLOC1S5	Q8TDH9	187 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SCYL1	Q96KG9	808 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TMEM237	Q96Q45	408 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TCF12	Q99081	682 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	MRPL57	Q9BQC6	102 aa	Known RBP	11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TDRD1	Q9BXT4	1180 aa	Known RBP	11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TPSD1	Q9BZJ3	242 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SLC40A1	Q9NP59	571 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	NLE1	Q9NVX2	485 aa	Predicted RBP	11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	OXSM	Q9NWU1	459 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	HACD3	Q9P035	362 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	EBF1	Q9UH73	591 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	VPS28	Q9UK41	221 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	INVS	Q9Y283	1065 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	VPS9D1	Q9Y2B5	631 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	OR51B4	Q9Y5P0	310 aa		11.92	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TTC24	A2A3L6	582 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TRAFD1	O14545	582 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RASSF9	O75901	435 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TMCC1	O94876	653 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	S1PR4	O95977	384 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CYBB	P04839	570 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RBP1	P09455	135 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	NQO1	P15559	274 aa	Known RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SAT1	P21673	171 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	GLDC	P23378	1020 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CSNK1D	P48730	415 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	AP1S1	P61966	158 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ARF5	P84085	180 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	IRF9	Q00978	393 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SLC20A2	Q08357	652 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ITGA9	Q13797	1035 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	HSF5	Q4G112	596 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	USP39	Q53GS9	565 aa	Known RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	EOGT	Q5NDL2	527 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	LIPM	Q5VYY2	423 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	LRRC8E	Q6NSJ5	796 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TMEM92	Q6UXU6	159 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ZCCHC23	Q6ZST2	131 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	MFN1	Q8IWA4	741 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PGBD3	Q8N328	593 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PHTF2	Q8N3S3	785 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TERB1	Q8NA31	727 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RMDN1	Q96DB5	314 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CCDC126	Q96EE4	140 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	OMD	Q99983	421 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	C19orf43	Q9BQ61	176 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	LRMDA	Q9H2I8	198 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	MRPL46	Q9H2W6	279 aa	Known RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	POPDC3	Q9HBV1	291 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	INTS10	Q9NVR2	710 aa	Known RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	DNAJC28	Q9NX36	388 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	LNPEP	Q9UIQ6	1025 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	APOBEC2	Q9Y235	224 aa	Known RBP	11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	DNAJC16	Q9Y2G8	782 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	VWA7	Q9Y334	891 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RAI2	Q9Y5P3	530 aa		11.91	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CD3EAP	O15446	510 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PHGDH	O43175	533 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	LTA4H	P09960	611 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ALOX15	P16050	662 aa	Predicted RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SERPINB5	P36952	375 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ABCG1	P45844	678 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	DGKG	P49619	791 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	AQP5	P55064	265 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TAS2R39	P59534	338 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RPL26	P61254	145 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	GALNT3	Q14435	633 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CES4A	Q5XG92	561 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SDE2	Q6IQ49	451 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	NCEH1	Q6PIU2	408 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CNST	Q6PJW8	725 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	AFTPH	Q6ULP2	937 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	TRMT11	Q7Z4G4	463 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CENPL	Q8N0S6	344 aa	Predicted RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ZNF557	Q8N988	423 aa	Predicted RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ACVR1C	Q8NER5	493 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	OR4L1	Q8NH43	312 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	DDI1	Q8WTU0	396 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	KCTD4	Q8WVF5	259 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	STON2	Q8WXE9	905 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ALG14	Q96F25	216 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ARRDC1-AS1	Q9H2J1	176 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	POLM	Q9NP87	494 aa	Predicted RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	PARD6A	Q9NPB6	346 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	SEMA4G	Q9NTN9	838 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	CATSPERZ	Q9NTU4	200 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ZNF358	Q9NW07	568 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	MARK1	Q9P0L2	795 aa		11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	RPL26L1	Q9UNX3	145 aa	Known RBP	11.9	□□□□□ -0.5
CYB561A3-215	ENST00000540317	ARL5A	Q9Y689	179 aa		11.9	□□□□□ -0.5

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