RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ARL5CA6NH57 179 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TBX1O43435 398 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TRUB2O95900 331 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 ITGB3P05106 788 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PRKCHP24723 683 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 IRS1P35568 1242 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 LRP8Q14114 963 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 CES3Q6UWW8 571 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 SPPL2CQ8IUH8 684 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 SNX29P2Q8IUI4 249 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PARP8Q8N3A8 854 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TMEM102Q8N9M5 508 aaPredicted RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 GOLM1Q8NBJ4 401 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 FIG4Q92562 907 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 RMDN1Q96DB5 314 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 MCRS1Q96EZ8 462 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 CENPNQ96H22 339 aaPredicted RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 SH3YL1Q96HL8 342 aaPredicted RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 YTHDF1Q9BYJ9 559 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 SNX15Q9NRS6 342 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDB1-217ENST00000540166 SIPA1L1O43166 1804 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 PLOD2O00469 737 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 SOCS2O14508 198 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 KMOO15229 486 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 NUAK1O60285 661 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 MED26O95402 600 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 IGHA2P01877 340 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 ERVK-10P10266 1014 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 ALDH4A1P30038 563 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TUBA3EQ6PEY2 450 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 ADHFE1Q8IWW8 467 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 DCP1BQ8IZD4 617 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 MRPL43Q8N983 215 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 MCFD2Q8NI22 146 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 TFAP2CQ92754 450 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 UROC1Q96N76 676 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 GATA5Q9BWX5 397 aaPredicted RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 POPDC2Q9HBU9 364 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 EML4Q9HC35 981 aaKnown RBP8.66□□□□□ -1.02
DDB1-217ENST00000540166 BTBD3Q9Y2F9 522 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 SLC27A5Q9Y2P5 690 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 HCFC2Q9Y5Z7 792 aa8.66□□□□□ -1.02
DDB1-217ENST00000540166 NR5A2O00482 541 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 DYRK3O43781 588 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 MYF6P23409 242 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ABCG1P45844 678 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ERVFC1P60507 584 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 YWHAHQ04917 246 aaPredicted RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 ZNF252P-AS1Q0IIN9 211 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 SLC13A2Q13183 592 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 TUBA3CQ13748 450 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ARL13AQ5H913 290 aaPredicted RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 DCLRE1AQ6PJP8 1040 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ZNF773Q6PK81 442 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 PRR23CQ6ZRP0 262 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 PID1Q7Z2X4 250 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 COLGALT2Q8IYK4 626 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SLC4A11Q8NBS3 891 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 RNF145Q96MT1 663 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ACE2Q9BYF1 805 aaPredicted RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 FAM49BQ9NUQ9 324 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 IGKV6D-21A0A0A0MT36 114 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 LINC00854A0A1B0GVQ3 168 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 CCDC78A2IDD5 438 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 GSTA4O15217 222 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SLC22A2O15244 555 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 INPPL1O15357 1258 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 CCL16O15467 120 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 B4GALT5O43286 388 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SYNCRIPO60506 623 aaKnown RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 GPR32O75388 356 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 C8AP07357 584 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 MGAT1P26572 445 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 MPP1Q00013 466 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 TRAF3Q13114 568 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 PLD1Q13393 1074 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 TMEM132DQ14C87 1099 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 NOMO1Q15155 1222 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 EML3Q32P44 896 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 STXBP5Q5T5C0 1151 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 GRTP1Q5TC63 336 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 ERMP1Q7Z2K6 904 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 DDX53Q86TM3 631 aaKnown RBP8.65□□□□□ -1.02
DDB1-217ENST00000540166 CCDC28AQ8IWP9 274 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 RNF157Q96PX1 679 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SLC2A11Q9BYW1 496 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 EPS8L2Q9H6S3 715 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 MAGEE1Q9HCI5 957 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SCN3BQ9NY72 215 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 TRAF6Q9Y4K3 522 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 N6AMT1Q9Y5N5 214 aa8.65□□□□□ -1.02
DDB1-217ENST00000540166 SDK1Q7Z5N4 2213 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms