RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CIB1Q99828 191 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TTYH2Q9BSA4 534 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 TSEN34Q9BSV6 310 aaKnown RBP6.04□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF696Q9H7X3 374 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MINDY3Q9H8M7 445 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 FAM105AQ9NUU6 356 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MAT2BQ9NZL9 334 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
PTPRD-214ENST00000540109 MUSKO15146 869 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NCAM2O15394 837 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NDUFS2O75306 463 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PLATP00750 562 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF37AP17032 561 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SLC1A6P48664 564 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RPL7AP62424 266 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 FRG1Q14331 258 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 DDR2Q16832 855 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 INO80DQ53TQ3 878 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 INTS6LQ5JSJ4 861 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 HEATR6Q6AI08 1181 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 EIF5AL1Q6IS14 154 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ALKAL1Q6UXT8 129 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 LIMS2Q7Z4I7 341 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SCML4Q8N228 414 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 C12orf43Q96C57 262 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 C12orf66Q96MD2 445 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NSMCE2Q96MF7 247 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MND1Q9BWT6 205 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 DHX35Q9H5Z1 703 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZFYVE1Q9HBF4 777 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 POLG2Q9UHN1 485 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PCDHGB4Q9UN71 923 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 A0A1W2PPW3 197 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 F8VP50 259 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PIRO00625 290 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CST8O60676 142 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RNASEH1O60930 286 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CABYRO75952 493 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF286BP0CG31 522 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TCF4P15884 667 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 AZGP1P25311 298 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 G0S2P27469 103 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CRABP2P29373 138 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CYP2C18P33260 490 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 HNF4AP41235 474 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 AP1S2P56377 157 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CYP51A1Q16850 503 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 FAM83EQ2M2I3 478 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 EFHC2Q5JST6 749 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 FNBP1LQ5T0N5 605 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 EIF3MQ7L2H7 374 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZDHHC13Q8IUH4 622 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ARMC8Q8IUR7 673 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZDHHC14Q8IZN3 488 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 C7orf31Q8N865 590 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NPLOC4Q8TAT6 608 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CREB3L1Q96BA8 519 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MNTQ99583 582 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 GTPBP2Q9BX10 602 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ITM2CQ9NQX7 267 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PAQR5Q9NXK6 330 aaPredicted RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 KCTD5Q9NXV2 234 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PPM1HQ9ULR3 514 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TRPV2Q9Y5S1 764 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TCRBV7S2A1N4TA0A589 114 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 UGT2B11O75310 529 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TULP3O75386 442 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 GPR32O75388 356 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 KCNH1O95259 989 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 F9P00740 461 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MIPP30301 263 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ZNF252P-AS1Q0IIN9 211 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PKDCCQ504Y2 493 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CYP4Z2PQ8N1L4 340 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 URGCPQ8TCY9 931 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MCOLN3Q8TDD5 553 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RNF145Q96MT1 663 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 CPXM1Q96SM3 734 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TRIM54Q9BYV2 358 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NMUR2Q9GZQ4 415 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 WDR41Q9HAD4 459 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 EIF2B3Q9NR50 452 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 NPAP1Q9NZP6 1156 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 IFT52Q9Y366 437 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MFHAS1Q9Y4C4 1052 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 H7C2Y5 167 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 DUSP11O75319 330 aaKnown RBP6.03□□□□□ -1.44
PTPRD-214ENST00000540109 VTNP04004 478 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 APRTP07741 180 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MLNP12872 115 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TPSB2P20231 275 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 RBL1P28749 1068 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ABCG1P45844 678 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 ATP12AP54707 1039 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 PLD1Q13393 1074 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 TPSAB1Q15661 275 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 MYLK3Q32MK0 819 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SPDYE7PQ495Y7 208 aa6.03□□□□□ -1.44
PTPRD-214ENST00000540109 SEZ6Q53EL9 994 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms