RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 SPEM1Q8N4L4 309 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 OR13C4Q8NGS5 318 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 OR2T34Q8NGX1 318 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 MRRFQ96E11 262 aaKnown RBP11.72□□□□□ -0.53
VTN-202ENST00000539746 DTD2Q96FN9 168 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 FAM96AQ9H5X1 160 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 RMI1Q9H9A7 625 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 LTB4R2Q9NPC1 389 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 IL26Q9NPH9 171 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 PHPT1Q9NRX4 125 aaPredicted RBP11.72□□□□□ -0.53
VTN-202ENST00000539746 SLC39A10Q9ULF5 831 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 FADS3Q9Y5Q0 445 aa11.72□□□□□ -0.53
VTN-202ENST00000539746 MYO18AQ92614 2054 aaKnown RBP11.72□□□□□ -0.53
VTN-202ENST00000539746 MIA3Q5JRA6 1907 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 AGAP14A8MT82 685 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 MID1O15344 667 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 RHOBTB1O94844 696 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 APBB3O95704 486 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 S1PR4O95977 384 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 AHSGP02765 367 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CTSLP07711 333 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 DGKAP23743 735 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 HTR1BP28222 390 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CCNFP41002 786 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 GPR1P46091 355 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 NUMBP49757 651 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 IL2P60568 153 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TMPRSS15P98073 1019 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 PTSQ03393 145 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CNTN1Q12860 1018 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 LRRC14Q15048 493 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CDKN3Q16667 212 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TTMPQ5BVD1 217 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TXNDC11Q6PKC3 985 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 KIAA1324Q6UXG2 1013 aaKnown RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 ADAMTSL4Q6UY14 1074 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 MACC1Q6ZN28 852 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 RAB44Q7Z6P3 723 aaPredicted RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TAX1BP1Q86VP1 789 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TRIM69Q86WT6 500 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CCDC63Q8NA47 563 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 DDHD1Q8NEL9 900 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 COQ10AQ96MF6 247 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 CAPS2Q9BXY5 557 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 TRIM54Q9BYV2 358 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 VPS11Q9H270 941 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 LMAN1LQ9HAT1 526 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 SNX15Q9NRS6 342 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 SPATS2LQ9NUQ6 558 aaKnown RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 SLC2A6Q9UGQ3 507 aa11.71□□□□□ -0.53
VTN-202ENST00000539746 NDRG2Q9UN36 371 aaKnown RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 DNMT3AQ9Y6K1 912 aaPredicted RBP11.71□□□□□ -0.53
VTN-202ENST00000539746 A0A096LPK6 155 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 TCRBV21S2A2A0A5A6 115 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 TMEM120BA0PK00 339 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 FAM170BA6NMN3 283 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 H3BQF6 201 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 GJB3O75712 270 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 SLC25A14O95258 325 aaPredicted RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 IGLV3-19P01714 112 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 S100BP04271 92 aaPredicted RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 RPN2P04844 631 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 HOXC4P09017 264 aaPredicted RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 LTA4HP09960 611 aaKnown RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 PYGBP11216 843 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 C6P13671 934 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 CHRM3P20309 590 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 GRK2P25098 689 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 ARNTP27540 789 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 AKT2P31751 481 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 GKP32189 559 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 SERPINB5P36952 375 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 DPP6P42658 865 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 CTBP1Q13363 440 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 ACAP2Q15057 778 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 HENMT1Q5T8I9 393 aaKnown RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 RAET1GQ6H3X3 334 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 TTC23LQ6PF05 361 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 OTOAQ7RTW8 1153 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 SERPINA9Q86WD7 417 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 HORMAD1Q86X24 394 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 DCP2Q8IU60 420 aaKnown RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 SLC22A9Q8IVM8 553 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 SIX5Q8N196 739 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 AFAP1L2Q8N4X5 818 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 DCLK2Q8N568 766 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 BEND7Q8N7W2 519 aaPredicted RBP11.7□□□□□ -0.54
VTN-202ENST00000539746 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
VTN-202ENST00000539746 OR14C36Q8NHC7 312 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms