RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 H7C0S8 307 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 CDX4O14627 284 aaPredicted RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 FPGTO14772 594 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A9O60656 530 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 FAM153BP0C7A2 387 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A6P19224 532 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A1P22309 533 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A4P22310 534 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 ADRA1DP25100 572 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A3P35503 534 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A5P35504 534 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 NPY2RP49146 381 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 CDK3Q00526 305 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 DHX9Q08211 1270 aaKnown RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 PDE1CQ14123 709 aaPredicted RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 SEMA3AQ14563 771 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 STAT4Q14765 748 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 SLMAPQ14BN4 828 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 FASTKD3Q14CZ7 662 aaKnown RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 CSRP2Q16527 193 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 FAM153CQ494X1 144 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 TSTD2Q5T7W7 516 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 FAM151BQ6UXP7 276 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 ADAMTSL4Q6UY14 1074 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 IQCHQ86VS3 1027 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 HEATR4Q86WZ0 1026 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 DTX3LQ8TDB6 740 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 MFSD3Q96ES6 412 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 CDKN2AIPNLQ96HQ2 116 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 TBATAQ96M53 351 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 KIFC1Q9BW19 673 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 TCEAL2Q9H3H9 227 aaPredicted RBP12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A7Q9HAW7 530 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A10Q9HAW8 530 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 UGT1A8Q9HAW9 530 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 PKD2L2Q9NZM6 624 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 RAB23Q9ULC3 237 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 ST14Q9Y5Y6 855 aa12.91□□□□□ -0.34
CCDC42-202ENST00000539522 SPTY2D1-AS1A0A0U1RR47 76 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 CCDC162PA2VCL2 907 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 E7ESA3 106 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 GDF9O60383 454 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 CRTAMO95727 393 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 CFIP05156 583 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 CEACAM5P06731 702 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 HOXC4P09017 264 aaPredicted RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 TSHRP16473 764 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 ENGP17813 658 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 NFKBIAP25963 317 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 SPAM1P38567 509 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 POLD2P49005 469 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 B4GALNT1Q00973 533 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 SEPT6Q14141 434 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 ZNF423Q2M1K9 1284 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 ZNF542PQ5EBM4 170 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 PCID2Q5JVF3 399 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 UBAP2Q5T6F2 1119 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 RAET1GQ6H3X3 334 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 KANSL1Q7Z3B3 1105 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 PTAR1Q7Z6K3 402 aaPredicted RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 GSPT2Q8IYD1 628 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 PIANPQ8IYJ0 282 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 UNC5BQ8IZJ1 945 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 MREGQ8N565 214 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 TRAM1L1Q8N609 369 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 STYXQ8WUJ0 223 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 NAT14Q8WUY8 206 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 KLHDC7BQ96G42 594 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 FUT8Q9BYC5 575 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 IL22Q9GZX6 179 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 FGF22Q9HCT0 170 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 MRPL40Q9NQ50 206 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 RIMKLBQ9ULI2 386 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 SLC6A14Q9UN76 642 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 SOX13Q9UN79 622 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 DCHS1Q96JQ0 3298 aa12.9□□□□□ -0.34
CCDC42-202ENST00000539522 TDRD6O60522 2096 aaKnown RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 EP300Q09472 2414 aaPredicted RBP12.9□□□□□ -0.34
CCDC42-202ENST00000539522 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 GLYATL1P3A0A0U1RQE8 302 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 HEATR9A2RTY3 570 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 C2orf81A6NN90 581 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 ARHGAP33O14559 1287 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 INPP4BO15327 924 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
CCDC42-202ENST00000539522 SGTAO43765 313 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 LRP3O75074 770 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
CCDC42-202ENST00000539522 SRP72O76094 671 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms