RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RNF168Q8IYW5 571 aaPredicted RBP12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 TFAP2CQ92754 450 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 ZIC5Q96T25 663 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 YIPF2Q9BWQ6 316 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 RPF2Q9H7B2 306 aaKnown RBP12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 TMEM248Q9NWD8 314 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 COQ6Q9Y2Z9 468 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 ST14Q9Y5Y6 855 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 ARL5AQ9Y689 179 aa12.52□□□□□ -0.4
SFSWAP-208ENST00000539506 MIA3Q5JRA6 1907 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 HMBSP08397 361 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 PIRTP0C851 137 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 MATN1P21941 496 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC7A1P30825 629 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 RENBPP51606 427 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 STX5Q13190 355 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 GRB7Q14451 532 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 CYP51A1Q16850 503 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 ANKRD34AQ69YU3 496 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 Q6ZNX1 250 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 PIWIL3Q7Z3Z3 882 aaKnown RBP12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 FUNDC1Q8IVP5 155 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC15A4Q8N697 577 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 LINC01599Q8WXQ3 324 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 ESAMQ96AP7 390 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 PBXIP1Q96AQ6 731 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 PLEKHA8Q96JA3 519 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 TBATAQ96M53 351 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 NPLQ9BXD5 320 aaPredicted RBP12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 ZYG11BQ9C0D3 744 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 ZFYVE28Q9HCC9 887 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 SACM1LQ9NTJ5 587 aa12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 PAIP2BQ9ULR5 123 aaKnown RBP12.52□□□□□ -0.41
SFSWAP-208ENST00000539506 A8MU76 341 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ALDOCP09972 364 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 RHOQP17081 205 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 CCND3P30281 292 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 BMXP51813 675 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 RPL26P61254 145 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 MERTKQ12866 999 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 RFTN1Q14699 578 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 EGFLAMQ63HQ2 1017 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 GALNT18Q6P9A2 607 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TBPL2Q6SJ96 375 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TANKQ92844 425 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 PRG3Q9Y2Y8 225 aaPredicted RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 IGLV3-10A0A075B6K4 115 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 A0A1B0GTL3 188 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TRPC5OSA6NMA1 111 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TRIM24O15164 1050 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 OAZ2O95190 189 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 LINC00032P0C843 101 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 MAP4P27816 1152 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 NUP107P57740 925 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 DSC1Q08554 894 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 BFSP2Q13515 415 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ACAP2Q15057 778 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TMEM214Q6NUQ4 689 aaKnown RBP12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 MSANTD2Q6P1R3 559 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 UROC1Q96N76 676 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 HBEGFQ99075 208 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 A0A087WXM4 84 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 LOC285095A0A1B0GVY8 99 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ADAM23O75077 832 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 BAIAP3O94812 1187 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ALDH4A1P30038 563 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 CLCN5P51795 746 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 MLLT10P55197 1068 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 RELAQ04206 551 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 FPGSQ05932 587 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 ARMCX6Q7L4S7 300 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 COLGALT2Q8IYK4 626 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TCF12Q99081 682 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TBC1D23Q9NUY8 699 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 SLC27A5Q9Y2P5 690 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 TIMM22Q9Y584 194 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
SFSWAP-208ENST00000539506 A0A0J9YYE9 177 aa12.5□□□□□ -0.41
SFSWAP-208ENST00000539506 DHRS12A0PJE2 317 aa12.5□□□□□ -0.41
SFSWAP-208ENST00000539506 FUOMA2VDF0 154 aa12.5□□□□□ -0.41
SFSWAP-208ENST00000539506 NCF1BA6NI72 391 aaPredicted RBP12.5□□□□□ -0.41
SFSWAP-208ENST00000539506 NCF1CA8MVU1 366 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms