RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 GALNT13Q8IUC8 556 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 CCDC50Q8IVM0 306 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 RCOR2Q8IZ40 523 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 NAGSQ8N159 534 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 CCHCR1Q8TD31 782 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 EID2BQ96D98 161 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 SCARF2Q96GP6 870 aaPredicted RBP14.86□□□□□ -0.03
RAB40B-202ENST00000538809 CALR3Q96L12 384 aaKnown RBP14.86□□□□□ -0.03
RAB40B-202ENST00000538809 TMEM74Q96NL1 305 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 HERPUD2Q9BSE4 406 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 STRADBQ9C0K7 418 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 SLC25A51Q9H1U9 297 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 GLOD4Q9HC38 313 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 ARFGAP3Q9NP61 516 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 UBP1Q9NZI7 540 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 CNOT6Q9ULM6 557 aaKnown RBP14.86□□□□□ -0.03
RAB40B-202ENST00000538809 SHOC2Q9UQ13 582 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 ZNF711Q9Y462 761 aa14.86□□□□□ -0.03
RAB40B-202ENST00000538809 CDRT15L2A8MXV6 281 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 PLD2O14939 933 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 KLK10O43240 276 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 PMPCBO75439 489 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 CCKBRP32239 447 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 CD68P34810 354 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 UGT1A5P35504 534 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 CXADRP78310 365 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 B4GALNT1Q00973 533 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 WASHC5Q12768 1159 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 BIRC2Q13490 618 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 AMZ1Q400G9 498 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 PHF19Q5T6S3 580 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 BBS12Q6ZW61 710 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 BZW1Q7L1Q6 419 aaKnown RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 DAAM2Q86T65 1068 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 ZC3H18Q86VM9 953 aaKnown RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 C17orf82Q86X59 251 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 JAMLQ86YT9 394 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 FBXO39Q8N4B4 442 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 ARL14Q8N4G2 192 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 LRRC57Q8N9N7 239 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 TFB1MQ8WVM0 346 aaKnown RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 TEKT5Q96M29 485 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 BAG1Q99933 345 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-202ENST00000538809 FAM83DQ9H4H8 585 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 RDH14Q9HBH5 336 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 IMPACTQ9P2X3 320 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 PISDQ9UG56 409 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 ZNHIT2Q9UHR6 403 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 MGAQ8IWI9 3026 aa14.85□□□□□ -0.03
RAB40B-202ENST00000538809 TRBV23OR9-2A0A075B6M9 112 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 B4GAT1O43505 415 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 DNAJC6O75061 913 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ITGA2BP08514 1039 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ITIH1P19827 911 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 NFKB1P19838 968 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 CTNNA2P26232 953 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ALDH4A1P30038 563 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 CDK18Q07002 472 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 NOMO1Q15155 1222 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ZNF648Q5T619 568 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-202ENST00000538809 CHST15Q7LFX5 561 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ZNF438Q7Z4V0 828 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 CLEC14AQ86T13 490 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ZNF761Q86XN6 746 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-202ENST00000538809 GPR26Q8NDV2 337 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 P3H4Q92791 437 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 QKIQ96PU8 341 aaKnown RBP eCLIP14.84□□□□□ -0.03
RAB40B-202ENST00000538809 NUDT22Q9BRQ3 303 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 SPATA16Q9BXB7 569 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 SEMA6CQ9H3T2 930 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ZFYVE1Q9HBF4 777 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 CPNE5Q9HCH3 593 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 VPS18Q9P253 973 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.84□□□□□ -0.03
RAB40B-202ENST00000538809 LOXL2Q9Y4K0 774 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 PCDHA3Q9Y5H8 950 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 SPO11Q9Y5K1 396 aa14.84□□□□□ -0.03
RAB40B-202ENST00000538809 ATRXP46100 2492 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 A0A0U1RQJ8 604 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 GRID2IPA4D2P6 1211 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 TMX2-CTNND1H3BSU7 103 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 APOC4-APOC2K7ER74 178 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 PPM1DO15297 605 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 IPO7O95373 1038 aaKnown RBP14.83□□□□□ -0.04
RAB40B-202ENST00000538809 NDST3O95803 873 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 EML2O95834 649 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 APOC2P02655 101 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 JMJD7P0C870 316 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 ACP5P13686 325 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 PTPN7P35236 360 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 COPS2P61201 443 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 ZFP36L1Q07352 338 aaKnown RBP14.83□□□□□ -0.04
RAB40B-202ENST00000538809 EIF3IQ13347 325 aaKnown RBP14.83□□□□□ -0.04
RAB40B-202ENST00000538809 ZNF569Q5MCW4 686 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 BROXQ5VW32 411 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 USP53Q70EK8 1073 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 SLITRK4Q8IW52 837 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 HEMGNQ9BXL5 484 aa14.83□□□□□ -0.04
RAB40B-202ENST00000538809 GPR63Q9BZJ6 419 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms