RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 MATN2O00339 956 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 MTX2O75431 263 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 CES1P23141 567 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 MAGEA10P43363 369 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SLC6A11P48066 632 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 AGTR2P50052 363 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 CHRNA6Q15825 494 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 CDKN3Q16667 212 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 KLC3Q6P597 504 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 CRTC1Q6UUV9 634 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 EPGNQ6UW88 154 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SERPINA9Q86WD7 417 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 PTGR2Q8N8N7 351 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 MAGEE1Q9HCI5 957 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 TCF20Q9UGU0 1960 aaKnown RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 L3MBTL1Q9Y468 752 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SERPINA6P08185 405 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 PKMP14618 531 aaKnown RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 GM2AP17900 193 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SERPINB5P36952 375 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 DHCR24Q15392 516 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 DBN1Q16643 649 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 C18orf21Q32NC0 220 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 RBM15BQ8NDT2 890 aaKnown RBP14.04□□□□□ -0.16
ACTN1-205ENST00000538545 OR2A12Q8NGT7 310 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 RDH11Q8TC12 318 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 PEX13Q92968 403 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 KCNA7Q96RP8 456 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SUV39H2Q9H5I1 410 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 TAS2R13Q9NYV9 303 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 GIMAP2Q9UG22 337 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 HS3ST2Q9Y278 367 aa14.04□□□□□ -0.16
ACTN1-205ENST00000538545 SCN8AQ9UQD0 1980 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 TMEM114B3SHH9 223 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 BTN3A1O00481 513 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SORBS2O94875 1100 aaKnown RBP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 HLA-EP13747 358 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 PTPN4P29074 926 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SERPINA4P29622 427 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 POLD2P49005 469 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 FOXA1P55317 472 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SNRPD1P62314 119 aaKnown RBP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 RARS2Q5T160 578 aaKnown RBP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SREK1Q8WXA9 508 aaKnown RBP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 CATSPER2Q96P56 530 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 NKX2-4Q9H2Z4 354 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 WASH3PC4AMC7 463 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 E5RI56 91 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 GYG2O15488 501 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 LINC01565O15544 149 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 MGRN1O60291 552 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SUPT3HO75486 399 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 TRIM16O95361 564 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 CYP17A1P05093 508 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 PRKAA2P54646 552 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SLC25A3Q00325 362 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 LAMB3Q13751 1172 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SEL1L3Q68CR1 1132 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 GALNT7Q86SF2 657 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 CD200R1Q8TD46 325 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SLC45A3Q96JT2 553 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 DUS2Q9NX74 493 aaKnown RBP14.03□□□□□ -0.16
ACTN1-205ENST00000538545 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
ACTN1-205ENST00000538545 MYO15AQ9UKN7 3530 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 CFAP73A6NFT4 308 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 PLK4O00444 970 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 ENTPD5O75356 428 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 LEFTY1O75610 366 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 ATP6V1G2O95670 118 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 CTSLP07711 333 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 GFAPP14136 432 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.16
ACTN1-205ENST00000538545 PTSQ03393 145 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 UNC50Q53HI1 259 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 FAM78AQ5JUQ0 283 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 PIWIL4Q7Z3Z4 852 aaKnown RBP14.02□□□□□ -0.16
ACTN1-205ENST00000538545 LMNTD2Q8IXW0 634 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 SCAMP4Q969E2 229 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 NXPE3Q969Y0 559 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 LINGO1Q96FE5 620 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 ATOH8Q96SQ7 321 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.16
ACTN1-205ENST00000538545 GSTO2Q9H4Y5 243 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 TCF7L2Q9NQB0 619 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 INTS10Q9NVR2 710 aaKnown RBP14.02□□□□□ -0.16
ACTN1-205ENST00000538545 FAM8A1Q9UBU6 413 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 MID2Q9UJV3 735 aa14.02□□□□□ -0.16
ACTN1-205ENST00000538545 DOCK8Q8NF50 2099 aa14.02□□□□□ -0.17
ACTN1-205ENST00000538545 KRT87PA6NCN2 255 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms