RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NFKBIL1Q9UBC1 381 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 TCAF1Q9Y4C2 921 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MYH13Q9UKX3 1938 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PIPSLA2A3N6 862 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MTMR11A4FU01 709 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MCIDASD6RGH6 385 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 KLF8O95600 359 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 CFHP08603 1231 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ZNF24P17028 368 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 IGFALSP35858 605 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RPL3P39023 403 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 RXRGP48443 463 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 INAVAQ3KP66 663 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 DEF8Q6ZN54 512 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 TMEM209Q96SK2 561 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MYLK2Q9H1R3 596 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SPATS2LQ9NUQ6 558 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 LZTS1Q9Y250 596 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 EDDM13A0A1B0GTR0 161 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 AXIN1O15169 862 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 AP2A1O95782 977 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 GALTP07902 379 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 HAPLN1P10915 354 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 ACTR1BP42025 376 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RPIAP49247 311 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ACTR1AP61163 376 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 LSM12Q3MHD2 195 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 ADGRF1Q5T601 910 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 HFE2Q6ZVN8 426 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 BNIPLQ7Z465 357 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ZNF276Q8N554 614 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 AENQ8WTP8 325 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 ALG3Q92685 438 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RAD51AP1Q96B01 352 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 EXOSC8Q96B26 276 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 SLC25A23Q9BV35 468 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 NCDNQ9UBB6 729 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CYP8B1Q9UNU6 501 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 HEBP2Q9Y5Z4 205 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SCN11AQ9UI33 1791 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 LINC00854A0A1B0GVQ3 168 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 BCLAF3A2AJT9 711 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 TK2O00142 265 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 AZIN1O14977 448 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 IRAK2O43187 625 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SNAP91O60641 907 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CNOT3O75175 753 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 ZNF865P0CJ78 1059 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 AVPR1BP47901 424 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 HSPA7P48741 367 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PGDP52209 483 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 TAF1AQ15573 450 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 DAW1Q8N136 415 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 TCAIMQ8N3R3 496 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 OR52L1Q8NGH7 329 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PNPT1Q8TCS8 783 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 IRF7Q92985 503 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RIOK2Q9BVS4 552 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 SUV39H2Q9H5I1 410 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SFXN1Q9H9B4 322 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MRTO4Q9UKD2 239 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 NID2Q14112 1375 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 TCRBV7S2A1N4TA0A589 114 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 H3BQF6 201 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MMP20O60882 483 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RHOP08100 348 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ITGAXP20702 1163 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 PTPN4P29074 926 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SCTRP47872 440 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 ZNF776Q68DI1 518 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 STK32CQ86UX6 486 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MCEMP1Q8IX19 187 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 RNF168Q8IYW5 571 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 SLC22A17Q8WUG5 538 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 OR52E6Q96RD3 313 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 DPYSL5Q9BPU6 564 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SIKE1Q9BRV8 207 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 TMEM79Q9BSE2 394 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 C16orf70Q9BSU1 422 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CNPPD1Q9BV87 410 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 KLHL4Q9C0H6 718 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 REEP1Q9H902 201 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 C3orf14Q9HBI5 128 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MRPS30Q9NP92 439 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 MAPRE3Q9UPY8 281 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 SCML2Q9UQR0 700 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CFAP20Q9Y6A4 193 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 WNT9AO14904 365 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 MTHFRP42898 656 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 CHRNA4P43681 627 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 C1DQ13901 141 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 UBAP2LQ14157 1087 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 INTS11Q5TA45 600 aaKnown RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 CDCA2Q69YH5 1023 aaPredicted RBP5.33□□□□□ -1.56
LRP6-203ENST00000538239 FAM46DQ8NEK8 389 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 NXNL1Q96CM4 212 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 HAPLN3Q96S86 360 aa5.33□□□□□ -1.56
LRP6-203ENST00000538239 NTPCRQ9BSD7 190 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms