RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TEKT4Q8WW24 435 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 BOCQ9BWV1 1114 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 CDV3Q9UKY7 258 aaKnown RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 SPO11Q9Y5K1 396 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 MRFAP1Q9Y605 127 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 LOXHD1Q8IVV2 1947 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 TARSL2A2RTX5 802 aaKnown RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 TMEM63AO94886 807 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 GOT2P00505 430 aaKnown RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 CDH5P33151 784 aaPredicted RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 AP1S1P61966 158 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 CAMK2GQ13555 558 aaPredicted RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 GAS6Q14393 721 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 MINDY4Q4G0A6 757 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 ATP13A5Q4VNC0 1218 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 MSANTD2Q6P1R3 559 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 HSD11B1LQ7Z5J1 315 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 DDIASQ8IXT1 998 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 RCBTB1Q8NDN9 531 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 OR4L1Q8NH43 312 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 EPS8L3Q8TE67 593 aaKnown RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 COL26A1Q96A83 441 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 TMEM168Q9H0V1 697 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 WNT16Q9UBV4 365 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 ZNF711Q9Y462 761 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 GREB1LQ9C091 1923 aaPredicted RBP7.2□□□□□ -1.26
MSH6-209ENST00000538136 H3BM21 787 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 COPEO14579 308 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 VPS26AO75436 327 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 KRT37O76014 449 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 APOA4P06727 396 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 PCNAP12004 261 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 IL4RP24394 825 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 MXRA7P84157 204 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SLC20A2Q08357 652 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 DNAJC3Q13217 504 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SH2D4BQ5SQS7 431 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SHISA6Q6ZSJ9 500 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SFTPA2Q8IWL1 248 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 TMEM105Q8N8V8 129 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 DTWD2Q8NBA8 298 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SERPINB12Q96P63 405 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 PSKH2Q96QS6 385 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 SMC6Q96SB8 1091 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 EDEM2Q9BV94 578 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 FBXO5Q9UKT4 447 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 MMP17Q9ULZ9 603 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 FOCADQ5VW36 1801 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 FRYLO94915 3013 aa7.2□□□□□ -1.26
MSH6-209ENST00000538136 ABCA4P78363 2273 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 SPAARA0A1B0GVQ0 90 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 CD3EAPO15446 510 aaKnown RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 GFRA3O60609 400 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 SKAP2O75563 359 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 C9P02748 559 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 OR56A5P0C7T3 313 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 POLR2CP19387 275 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 CD38P28907 300 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 RGS4P49798 205 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ARSDP51689 593 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 SLC1A5Q15758 541 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 QPCTQ16769 361 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 CCDC91Q7Z6B0 441 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LRRC6Q86X45 466 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 CPNE9Q8IYJ1 553 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 SPEM1Q8N4L4 309 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 TMEM145Q8NBT3 493 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 PLA2G15Q8NCC3 412 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LCN9Q8WX39 176 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 MOCOSQ96EN8 888 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ALG9Q9H6U8 611 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 MBNL1Q9NR56 388 aaKnown RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 IDSP22304 550 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 COPS2P61201 443 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 AP5B1Q2VPB7 878 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 PPM1JQ5JR12 505 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LRRC38Q5VT99 294 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 OTUD1Q5VV17 481 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 KLC3Q6P597 504 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 DHRS13Q6UX07 377 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 PIM3Q86V86 326 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ARHGAP12Q8IWW6 846 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LILRA3Q8N6C8 439 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 ZCCHC10Q8TBK6 192 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 CAMK1GQ96NX5 476 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 TGM7Q96PF1 710 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LRFN3Q9BTN0 628 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 LRRC3Q9BY71 257 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 CDC42EP4Q9H3Q1 356 aaKnown RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 PRDM8Q9NQV8 689 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 ATXN7L1Q9ULK2 861 aaPredicted RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 NEMP2A6NFY4 417 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 GLULP15104 373 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 SPAM1P38567 509 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 MAZP56270 477 aaKnown RBP7.19□□□□□ -1.26
MSH6-209ENST00000538136 CYP4F3Q08477 520 aa7.19□□□□□ -1.26
MSH6-209ENST00000538136 WASHC5Q12768 1159 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms