RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 CYP2C8P10632 490 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PSMA4P25789 261 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 CD47Q08722 323 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CDO1Q16878 200 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 IGSF11Q5DX21 431 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 SAMD4BQ5PRF9 694 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 TRAPPC3LQ5T215 181 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PM20D1Q6GTS8 502 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FUNDC1Q8IVP5 155 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CCDC185Q8N715 623 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PLD5Q8N7P1 536 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FLCNQ8NFG4 579 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 BSNDQ8WZ55 320 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PYCR2Q96C36 320 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 AMBRA1Q9C0C7 1298 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 NTN4Q9HB63 628 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PAK5Q9P286 719 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 MAP10Q9P2G4 905 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PDE10AQ9Y233 779 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 MFHAS1Q9Y4C4 1052 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 DNMT3AQ9Y6K1 912 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 MOXD2PA6NHM9 499 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ZNF99A8MXY4 864 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 SMLR1H3BR10 107 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 TSPAN4O14817 238 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ZNF780AO75290 641 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 GFAPP14136 432 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 TNNI1P19237 187 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 SLC26A3P40879 764 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 NDST1P52848 882 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CD83Q01151 205 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 C6orf141Q5SZD1 244 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ENOSF1Q7L5Y1 443 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 NLRP8Q86W28 1048 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CDR2LQ86X02 465 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 PPHLN1Q8NEY8 458 aaKnown RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 TBATAQ96M53 351 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 MFSD14AQ96MC6 490 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 TM9SF2Q99805 663 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ACE2Q9BYF1 805 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 SLA2Q9H6Q3 261 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 TRMT13Q9NUP7 481 aaKnown RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 ERVK-18Q9QC07 812 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 NUFIP1Q9UHK0 495 aaKnown RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 AGAP5A6NIR3 686 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 RIMBP2O15034 1052 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 OR7A10O76100 309 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 PTTG1O95997 202 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 PRLP01236 227 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 C2P06681 752 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CYP2A6P11509 494 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 PSKH1P11801 424 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 IL10P22301 178 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 MAPK8P45983 427 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 DBPQ10586 325 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 GRM3Q14832 879 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 UGT3A2Q3SY77 523 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 RABL3Q5HYI8 236 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CES5AQ6NT32 575 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 C15orf39Q6ZRI6 1047 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 THAP5Q7Z6K1 395 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 SPPL2BQ8TCT7 592 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 PIWIL1Q96J94 861 aaKnown RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
RTN3-208ENST00000537981 UCK2Q9BZX2 261 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 MCCC2Q9HCC0 563 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 NEUROD4Q9HD90 331 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ERVK13-1Q9NX77 482 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 SYBUQ9NX95 663 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 GTSE1Q9NYZ3 720 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 ZNF69Q9UC07 566 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 TBX20Q9UMR3 447 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 CFL2Q9Y281 166 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 PTGDR2Q9Y5Y4 395 aa10.64□□□□□ -0.71
RTN3-208ENST00000537981 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 UPK1AO00322 258 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SLC9A3R1O14745 358 aaPredicted RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 TRIM16O95361 564 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TSPAN8P19075 237 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 CYP3A5P20815 502 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 PPM1FP49593 454 aaPredicted RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 DSTNP60981 165 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 MGAT3Q09327 533 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 PPIL2Q13356 520 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 AP3B2Q13367 1082 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 LAPTM5Q13571 262 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 UGCGQ16739 394 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 CA9Q16790 459 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 VPS26BQ4G0F5 336 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TSTD2Q5T7W7 516 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 FAM102BQ5T8I3 360 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TRNP1Q6NT89 227 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 ZNF544Q6NX49 715 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms