RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 LRRC73Q5JTD7 316 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 BRAT1Q6PJG6 821 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 ARHGAP36Q6ZRI8 547 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 Q6ZSR6 202 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 H2AFVQ71UI9 128 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 SRLQ86TD4 932 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 TTC7BQ86TV6 843 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 DCP2Q8IU60 420 aaKnown RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 SLC22A18ASQ8N1D0 253 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 ATPAF2Q8N5M1 289 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 FAM71BQ8TC56 605 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 HCAR2Q8TDS4 363 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 CXorf40AQ8TE69 158 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 CTNNBL1Q8WYA6 563 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 CNDP2Q96KP4 475 aaKnown RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 BMFQ96LC9 184 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 ZNF641Q96N77 438 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 ZNF599Q96NL3 588 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 LENG8Q96PV6 779 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 KLF6Q99612 283 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 CINPQ9BW66 212 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 C1QTNF7Q9BXJ2 289 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 PACSIN1Q9BY11 444 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 DEF6Q9H4E7 631 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 ATP13A3Q9H7F0 1226 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 PCDH12Q9NPG4 1184 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 ZNHIT6Q9NWK9 470 aaKnown RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 CTTNBP2NLQ9P2B4 639 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 RCOR3Q9P2K3 495 aaPredicted RBP7.08□□□□□ -1.28
YBX3-206ENST00000536823 ATP8A1Q9Y2Q0 1164 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 PCDHGA1Q9Y5H4 931 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 AHCTF1Q8WYP5 2266 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 CACNA1GO43497 2377 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 RP1P56715 2156 aa7.08□□□□□ -1.28
YBX3-206ENST00000536823 CELSR3Q9NYQ7 3312 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 PTPRQQ9UMZ3 2332 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 SPTY2D1-AS1A0A0U1RR47 76 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 FPGTO14772 594 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 MUSKO15146 869 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 MFSD11O43934 449 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 SDC3O75056 442 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 PIAS2O75928 621 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 LDOC1O95751 146 aaPredicted RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 PEX11BO96011 259 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 DGKAP23743 735 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 SERPINA4P29622 427 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 MAN1A1P33908 653 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 NTF4P34130 210 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 IGFALSP35858 605 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 GJC1P36383 396 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 HSPA9P38646 679 aaKnown RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 SSR1P43307 286 aaKnown RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 ACADVLP49748 655 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 RENBPP51606 427 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ARSEP51690 589 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 PFN3P60673 137 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 AP1S1P61966 158 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 HNRNPKP61978 463 aaKnown RBP eCLIP7.07□□□□□ -1.28
YBX3-206ENST00000536823 CLCQ05315 142 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
YBX3-206ENST00000536823 FZD2Q14332 565 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 KRT81Q14533 505 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ZNF235Q14590 738 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 TMEM52BQ4KMG9 183 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 TMEM201Q5SNT2 666 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 CFAP58Q5T655 872 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 SARM1Q6SZW1 724 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 CCNI2Q6ZMN8 369 aaPredicted RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 PARGQ86W56 976 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 CPNE8Q86YQ8 564 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 CAMK1DQ8IU85 385 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 LRRC49Q8IUZ0 686 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 EID2Q8N6I1 236 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 TP53I13Q8NBR0 393 aaPredicted RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 OR4C6Q8NH72 309 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ECHDC3Q96DC8 303 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 PSKH2Q96QS6 385 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 WRAP53Q9BUR4 548 aaKnown RBP7.07□□□□□ -1.28
YBX3-206ENST00000536823 WNT10AQ9GZT5 417 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ABHD10Q9NUJ1 306 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 SLAMF8Q9P0V8 285 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 LCMT1Q9UIC8 334 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 ADAM30Q9UKF2 790 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 NBEAQ8NFP9 2946 aa7.07□□□□□ -1.28
YBX3-206ENST00000536823 LAMA5O15230 3695 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
YBX3-206ENST00000536823 H3BS24 57 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 TRIM38O00635 465 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 TOR1BO14657 336 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 AKR1B10O60218 316 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 MAFKO60675 156 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 TRIM13O60858 407 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 SOCS5O75159 536 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 RFPL3O75679 317 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 TM7SF2O76062 418 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 HTR3BO95264 441 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 CSF2P04141 144 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 KRT7P08729 469 aa7.06□□□□□ -1.28
YBX3-206ENST00000536823 CELA3BP08861 270 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms