RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FLNCQ14315 2725 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 C1orf232A0A0U1RR37 186 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 DNAJC6O75061 913 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ATP1A1P05023 1023 aaKnown RBP19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 KRT7P08729 469 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SFTPCP11686 197 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NIPAL4Q0D2K0 466 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TBR1Q16650 682 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PRICKLE2Q7Z3G6 844 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ZNF761Q86XN6 746 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CPNE8Q86YQ8 564 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 CCNYQ8ND76 341 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LRRN4Q8WUT4 740 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ART4Q93070 314 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 NKD1Q969G9 470 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 PMEPA1Q969W9 287 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 FAF2Q96CS3 445 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 DDA1Q9BW61 102 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 ASPSCR1Q9BZE9 553 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SLC39A1Q9NY26 324 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 TMEM9Q9P0T7 183 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 UVRAGQ9P2Y5 699 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 LCMT1Q9UIC8 334 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 B3GALT1Q9Y5Z6 326 aa19.52■□□□□ 0.72
TNFRSF1B-204ENST00000536782 SYCE3A1L190 88 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CYSRT1A8MQ03 144 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 DUX1O43812 170 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 FAM87AP0C7U9 286 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ARSDP51689 593 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 TAS2R40P59535 323 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CYP4F2P78329 520 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GBE1Q04446 702 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ZFYVE27Q5T4F4 411 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CHST15Q7LFX5 561 aaPredicted RBP19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CCDC13Q8IYE1 715 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 IL22RA1Q8N6P7 574 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PQLC3Q8N755 202 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CCHCR1Q8TD31 782 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HDAC11Q96DB2 347 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 WDR24Q96S15 920 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 FAM83DQ9H4H8 585 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 STN1Q9H668 368 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PKD2L2Q9NZM6 624 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CNOT6Q9ULM6 557 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 NENFQ9UMX5 172 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PRKAB1Q9Y478 270 aa19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 OAS3Q9Y6K5 1087 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1B-204ENST00000536782 EFCAB7A8K855 629 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 B4E171 279 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ANKRD66B4E2M5 251 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 EML2O95834 649 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GYPCP04921 128 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 H2AFZP0C0S5 128 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 UGT1A3P35503 534 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 TSPAN7P41732 249 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SPINT3P49223 89 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HHEXQ03014 270 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SLC10A2Q12908 348 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 QPCTQ16769 361 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 DCAF12Q5T6F0 453 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HENMT1Q5T8I9 393 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 H2AFVQ71UI9 128 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 FAM129CQ86XR2 697 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HTR3CQ8WXA8 447 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CTNNBL1Q8WYA6 563 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ZNF830Q96NB3 372 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 MLPHQ9BV36 600 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CLMPQ9H6B4 373 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RMI1Q9H9A7 625 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SARS2Q9NP81 518 aaKnown RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 STARD5Q9NSY2 213 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 OCIAD1Q9NX40 245 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 DTLQ9NZJ0 730 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PDP2Q9P2J9 529 aa19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PCYT1BQ9Y5K3 369 aaPredicted RBP19.5■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RGSL1A5PLK6 1076 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 FADS2P1A8MWK0 482 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 GOLGA6L19H0YKK7 550 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 JCHAINP01591 159 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SLC2A4P14672 509 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ITGB6P18564 788 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CASP14P31944 242 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 CD86P42081 329 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 RAB15P59190 212 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KCNC4Q03721 635 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 IYDQ6PHW0 289 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 WDR74Q6RFH5 385 aaPredicted RBP19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 SH3KBP1Q96B97 665 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 HERPUD2Q9BSE4 406 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ADGRE3Q9BY15 652 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 TBC1D29Q9UFV1 150 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KCNK6Q9Y257 313 aa19.49■□□□□ 0.71
TNFRSF1B-204ENST00000536782 NBASA2RRP1 2371 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KCNK1O00180 336 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 WISP1O95388 367 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 MMP2P08253 660 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 ACP5P13686 325 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 KDELR1P24390 212 aa19.48■□□□□ 0.71
TNFRSF1B-204ENST00000536782 PPIDQ08752 370 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms