RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 MAP3K7O43318 606 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PIGNO95427 931 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PIRTP0C851 137 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 NMBRP28336 390 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TRAF2Q12933 501 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 POU6F1Q14863 301 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 IER5LQ5T953 404 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ZYG11AQ6WRX3 759 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GATA5Q9BWX5 397 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 COG4Q9H9E3 785 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 FBRSL1Q9HCM7 1045 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 IARS2Q9NSE4 1012 aaKnown RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 DEC1Q9P2X7 70 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 LIMD1Q9UGP4 676 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 EVLQ9UI08 416 aaPredicted RBP12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLC25A13Q9UJS0 675 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ERVW-1Q9UQF0 538 aa12.92□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TTC34A8MYJ7 566 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 HSPA4LO95757 839 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SERPINF2P08697 491 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ATXN1LP0C7T5 689 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 POLR2EP19388 210 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GMPRP36959 345 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLC25A3Q00325 362 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 IRF9Q00978 393 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GRM3Q14832 879 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 UGP2Q16851 508 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SIRPB2Q5JXA9 342 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 C1orf146Q5VVC0 180 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RANBP10Q6VN20 620 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TERB1Q8NA31 727 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 JADE3Q92613 823 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 HLA-CQ95604 372 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TDRD1Q9BXT4 1180 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 DRC3Q9H069 523 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLC27A6Q9Y2P4 619 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RAP2CQ9Y3L5 183 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CKAP5Q14008 2032 aa12.91□□□□□ -0.34
CDK5RAP3-202ENST00000536708 A0A0U1RQS6 177 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TARM1B6A8C7 271 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 MATN2O00339 956 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLC22A2O15244 555 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CRABP2P29373 138 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ADSLP30566 484 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 DLG2Q15700 870 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GSTA3Q16772 222 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ITPRIPL2Q3MIP1 535 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 VWA5B1Q5TIE3 1220 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 LIPMQ5VYY2 423 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CAMK1DQ8IU85 385 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ACVR1CQ8NER5 493 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CNDP1Q96KN2 507 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TRIB3Q96RU7 358 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RTKNQ9BST9 563 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CAB39LQ9H9S4 337 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 S100A14Q9HCY8 104 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SLCO1B7G3V0H7 640 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 NARSO43776 548 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PRLP01236 227 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 SBK3P0C264 359 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 HLA-EP13747 358 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 IL9P15248 144 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GABRB3P28472 473 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 KLF10Q13118 480 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 DMC1Q14565 340 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RYBPQ8N488 228 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ZNF557Q8N988 423 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CHST14Q8NCH0 376 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 PHC3Q8NDX5 983 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 OR2AP1Q8NGE2 309 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 GRIN3AQ8TCU5 1115 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 STYXQ8WUJ0 223 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 ATXN7L3BQ96GX2 97 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 TRIM4Q9C037 500 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 RAI2Q9Y5P3 530 aa12.9□□□□□ -0.34
CDK5RAP3-202ENST00000536708 AHSGP02765 367 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 COX4I1P13073 169 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ITGAXP20702 1163 aa12.89□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARCN1P48444 511 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms