RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PTPRJQ12913 1337 aa12.58□□□□□ -0.39
SPG11-203ENST00000535302 TCRBV9S1A1TA0A576 114 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 CCNE2O96020 404 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 STATHP02808 62 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 UGT2B4P06133 528 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 LYNP07948 512 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 KCNA5P22460 613 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 RYKP34925 604 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 PGDP52209 483 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 CDKL1Q00532 357 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 TOP3AQ13472 1001 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 DNASE1L2Q92874 299 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 HSFY1Q96LI6 401 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 EBNA1BP2Q99848 306 aaKnown RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 ACE2Q9BYF1 805 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 PCDH18Q9HCL0 1135 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 OR2AG2A6NM03 316 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 RFXANKO14593 260 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 MAGEC1O60732 1142 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 S100A6P06703 90 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 CD48P09326 243 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 GRM5P41594 1212 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 MMP14P50281 582 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 MTA1Q13330 715 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 HBEGFQ99075 208 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 TBX5Q99593 518 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 TTPALQ9BTX7 342 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 C12orf4Q9NQ89 552 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 ZNF446Q9NWS9 450 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 CCNDBP1O95273 360 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 CYP27C1Q4G0S4 372 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 ARSJQ5FYB0 599 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 PPM1JQ5JR12 505 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 C9orf64Q5T6V5 341 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 ARMCX6Q7L4S7 300 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 KREMEN1Q96MU8 473 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 GAL3ST4Q96RP7 486 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 FCF1Q9Y324 198 aaKnown RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 ZFP37Q9Y6Q3 630 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 BTBD19C9JJ37 291 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 MASP1P48740 699 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
SPG11-203ENST00000535302 ZNF730Q6ZMV8 503 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 ATCAYQ86WG3 371 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 C7orf61Q8IZ16 206 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 FAIM2Q9BWQ8 316 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 CTPS2Q9NRF8 586 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 TIMM22Q9Y584 194 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 TCRBV7S2A1N4TA0A589 114 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 RNF225M0QZC1 329 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
SPG11-203ENST00000535302 ARMC10Q8N2F6 343 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 AGAP11Q8TF27 550 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 PGM2Q96G03 612 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 ASB2Q96Q27 587 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 EBPLQ9BY08 206 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
SPG11-203ENST00000535302 SLC28A1O00337 649 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 IFNA6P05013 189 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SLC6A2P23975 617 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 IL12AP29459 219 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 DLG1Q12959 904 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 CXXC5Q7LFL8 322 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 XYLT1Q86Y38 959 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SLC9A9Q8IVB4 645 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 CCDC54Q8NEL0 328 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZHX1-C8orf76Q96EF9 292 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 QRFPRQ96P65 431 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 TLE6Q9H808 572 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SSR3Q9UNL2 185 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 WWP2O00308 870 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SAP18O00422 153 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 DSC2Q02487 901 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 MCEMP1Q8IX19 187 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 MEIOBQ8N635 442 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 OR4K2Q8NGD2 314 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 MRPL57Q9BQC6 102 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 NMUR1Q9HB89 426 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 SPAG4Q9NPE6 437 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 ZNF214Q9UL59 606 aaPredicted RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 LOC110117498-PIK3R3F6TDL0 507 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 HAT1O14929 419 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 HCN1O60741 890 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
SPG11-203ENST00000535302 MLYCDO95822 493 aa12.57□□□□□ -0.4
SPG11-203ENST00000535302 HTR1BP28222 390 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms