RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 PFDN6O15212 129 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 EFCAB14O75071 495 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CLASP2O75122 1294 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 ATP6AP2O75787 350 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 TSPAN12O95859 305 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 C8AP07357 584 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 RAG1P15918 1043 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 ACADSP16219 412 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 EEF1DP29692 281 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 GKP32189 559 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 SLC7A9P82251 487 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 SQLEQ14534 574 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 UGT3A2Q3SY77 523 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CMPK2Q5EBM0 449 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 BNC2Q6ZN30 1099 aaPredicted RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CLYBLQ8N0X4 340 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 PGAM4Q8N0Y7 254 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 FBXO39Q8N4B4 442 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 NKAPQ8N5F7 415 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CD200R1Q8TD46 325 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 JADE3Q92613 823 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 FUBP1Q96AE4 644 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 C19orf60Q96EN9 201 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 C3orf30Q96M34 536 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 NPAS2Q99743 824 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 MID1IP1Q9NPA3 183 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 GPC4O75487 556 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CSPG5O95196 566 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CD70P32970 193 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 HMGCLP35914 325 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 DPP6P42658 865 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CLCN4P51793 760 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CLNS1AP54105 237 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 FOXA1P55317 472 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 ART3Q13508 389 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 KBTBD2Q8IY47 623 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CPXM2Q8N436 756 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 SNX31Q8N9S9 440 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 PPFIBP2Q8ND30 876 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 ASB2Q96Q27 587 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 CDRT15Q96T59 188 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 WDR41Q9HAD4 459 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 DNAJC15Q9Y5T4 150 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 PTGDR2Q9Y5Y4 395 aa13.55□□□□□ -0.24
FOXRED1-218ENST00000534315 TRAV19A0A0A6YYK7 116 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PSMD12O00232 456 aaPredicted RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CFLARO15519 480 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 MAP3K7O43318 606 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CHRM3P20309 590 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PTGER3P43115 390 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 THOP1P52888 689 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PKNOX1P55347 436 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CACNG1Q06432 222 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 FASTKQ14296 549 aaKnown RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 GEN1Q17RS7 908 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 MPPE1Q53F39 396 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 LILRA6Q6PI73 481 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 LARP4Q71RC2 724 aaKnown RBP eCLIP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 EEF1AKMT1Q8WVE0 214 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 KCNJ9Q92806 393 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 USP13Q92995 863 aaPredicted RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 ACDQ96AP0 544 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 LINGO1Q96FE5 620 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 KCNA7Q96RP8 456 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 TNKS2Q9H2K2 1166 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 FBRSL1Q9HCM7 1045 aaKnown RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 SARS2Q9NP81 518 aaKnown RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 STK39Q9UEW8 545 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 ZNF510Q9Y2H8 683 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 SLC30A1Q9Y6M5 507 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 A0A1B0GTL3 188 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 NCF1BA6NI72 391 aaPredicted RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 SYCE1LA8MT33 242 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 IQCF5A8MTL0 148 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 NCF1CA8MVU1 366 aaPredicted RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 E5RI56 91 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 LEFTY2O00292 366 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 AZIN1O14977 448 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CXCL14O95715 111 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 FGF4P08620 206 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 NCF1P14598 390 aaPredicted RBP13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CD9P21926 228 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 CLCQ05315 142 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 BCL2L1Q07817 233 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PTK2BQ14289 1009 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PLEKHG6Q3KR16 790 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 AGKQ53H12 422 aa13.54□□□□□ -0.24
FOXRED1-218ENST00000534315 PIGGQ5H8A4 983 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms