RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 COX14Q96I36 57 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 DNAJC1Q96KC8 554 aaKnown RBP12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 IL22Q9GZX6 179 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 SYBUQ9NX95 663 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 BFARQ9NZS9 450 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 WHRNQ9P202 907 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 MCM8Q9UJA3 840 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 PKP3Q9Y446 797 aa12.65□□□□□ -0.39
RPUSD4-208ENST00000533628 FRYLO94915 3013 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 RALGAPA1Q6GYQ0 2036 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CACNA1EQ15878 2313 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 H7C0S8 307 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 SMAPO00193 183 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 SPAM1P38567 509 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 GPR1P46091 355 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 ARSDP51689 593 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CDK3Q00526 305 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 SLC7A5Q01650 507 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 BIRC2Q13490 618 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 PEX6Q13608 980 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 SEPT6Q14141 434 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 FZD2Q14332 565 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CHRNA6Q15825 494 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 FNBP1LQ5T0N5 605 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 TSTD2Q5T7W7 516 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 RAET1GQ6H3X3 334 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 C8orf74Q6P047 294 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 PTAR1Q7Z6K3 402 aaPredicted RBP12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 OR13J1Q8NGT2 312 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CDKN2AIPNLQ96HQ2 116 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 PWWP2AQ96N64 755 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 KIFC1Q9BW19 673 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 DPH5Q9H2P9 285 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CAAP1Q9H8G2 361 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 ERVMER34-1Q9H9K5 563 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 MRM3Q9HC36 420 aaKnown RBP12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 DMGDHQ9UI17 866 aaKnown RBP12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 FKBPLQ9UIM3 349 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 ADAMTS9Q9P2N4 1935 aa12.64□□□□□ -0.39
RPUSD4-208ENST00000533628 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SPTY2D1-AS1A0A0U1RR47 76 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 LNP1A1A4G5 178 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 AGAP14A8MT82 685 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 CCL22O00626 93 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 MAGEC1O60732 1142 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PYGLP06737 847 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ENGP17813 658 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 TUBB4BP68371 445 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 TMPRSS15P98073 1019 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 EIF2B5Q13144 721 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 NFATC4Q14934 902 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SHBQ15464 509 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ZNF423Q2M1K9 1284 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 MSS51Q4VC12 460 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ARMC3Q5W041 872 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 KCTD16Q68DU8 428 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 HEATR4Q86WZ0 1026 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PEX13Q92968 403 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 HINFPQ9BQA5 517 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ZSCAN5AQ9BUG6 496 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ZDHHC5Q9C0B5 715 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 UTP11Q9Y3A2 253 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 GLYATL1P3A0A0U1RQE8 302 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 CCDC78A2IDD5 438 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 GFRA3O60609 400 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SHOX2O60902 331 aaPredicted RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 C21orf59P57076 290 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 LAMB3Q13751 1172 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PDE1CQ14123 709 aaPredicted RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ATP13A5Q4VNC0 1218 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 GLE1Q53GS7 698 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ZDHHC24Q6UX98 284 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 MACC1Q6ZN28 852 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PRR23CQ6ZRP0 262 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 NLRP9Q7RTR0 991 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 ART4Q93070 314 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SKA1Q96BD8 255 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 TBATAQ96M53 351 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 VPS35Q96QK1 796 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 SPATA16Q9BXB7 569 aa12.63□□□□□ -0.39
RPUSD4-208ENST00000533628 FRMD8Q9BZ67 464 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms