RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 VEGFDO43915 354 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 SLC25A14O95258 325 aaPredicted RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 NPY2RP49146 381 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 ZNF140P52738 457 aaPredicted RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 GPS1Q13098 491 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 LRP8Q14114 963 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 TRIP6Q15654 476 aaKnown RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 SKIDA1Q1XH10 827 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 ZCCHC8Q6NZY4 707 aaKnown RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 SYT10Q6XYQ8 523 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 KDM7AQ6ZMT4 941 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 DEFB124Q8NES8 71 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 OR4K2Q8NGD2 314 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 PTCD2Q8WV60 388 aaKnown RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 OR1E3Q8WZA6 343 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 TSACCQ96A04 125 aaPredicted RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 CAPZA3Q96KX2 299 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 AGAP2Q99490 1192 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 LRRC61Q9BV99 259 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 ZCCHC2Q9C0B9 1178 aaKnown RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 NLE1Q9NVX2 485 aaPredicted RBP20.8■□□□□ 0.92
VPS51-211ENST00000533487 SMARCAL1Q9NZC9 954 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 FTSJ1Q9UET6 329 aa20.8■□□□□ 0.92
VPS51-211ENST00000533487 DCDC2BA2VCK2 349 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 MROH6A6NGR9 719 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 NDC80O14777 642 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 FANCGO15287 622 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 SDC3O75056 442 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 ANXA6P08133 673 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 MLNP12872 115 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 ADRA1DP25100 572 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 OLIG2Q13516 323 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 DHX34Q14147 1143 aaKnown RBP20.79■□□□□ 0.92
VPS51-211ENST00000533487 PPP1R7Q15435 360 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 GPR33Q49SQ1 333 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 ZNF542PQ5EBM4 170 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 LDLRAP1Q5SW96 308 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 ALS2CLQ60I27 953 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 PCGF5Q86SE9 256 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 C17orf53Q8N3J3 647 aaPredicted RBP20.79■□□□□ 0.92
VPS51-211ENST00000533487 MCUQ8NE86 351 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 OR52K1Q8NGK4 314 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 LMX1AQ8TE12 382 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 HEXDCQ8WVB3 486 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 GLMNQ92990 594 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 ULK4Q96C45 1275 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 PDXPQ96GD0 296 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 IL22Q9GZX6 179 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 DDX47Q9H0S4 455 aaKnown RBP20.79■□□□□ 0.92
VPS51-211ENST00000533487 CYP4F12Q9HCS2 524 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 BPIFA1Q9NP55 256 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 BFARQ9NZS9 450 aa20.79■□□□□ 0.92
VPS51-211ENST00000533487 MYLKQ15746 1914 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 AGAP14A8MT82 685 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 SMAPO00193 183 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 LDOC1O95751 146 aaPredicted RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 DUSP3P51452 185 aaPredicted RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 ILF3Q12906 894 aaKnown RBP eCLIP20.78■□□□□ 0.92
VPS51-211ENST00000533487 TUBB2AQ13885 445 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 LRRC8BQ6P9F7 803 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 PRUNE1Q86TP1 453 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 RBFAQ8N0V3 343 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 TAB3Q8N5C8 712 aaPredicted RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 EID2Q8N6I1 236 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 ZNF398Q8TD17 642 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 TUBB2BQ9BVA1 445 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 GSDMCQ9BYG8 508 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 CARS2Q9HA77 564 aaKnown RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 XAB2Q9HCS7 855 aaKnown RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 PNMA8BQ9ULN7 279 aaPredicted RBP20.78■□□□□ 0.92
VPS51-211ENST00000533487 DOLKQ9UPQ8 538 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 BTBD3Q9Y2F9 522 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 PCDHGA1Q9Y5H4 931 aa20.78■□□□□ 0.92
VPS51-211ENST00000533487 INPP4BO15327 924 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 NUAK1O60285 661 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 SRP72O76094 671 aaKnown RBP20.77■□□□□ 0.92
VPS51-211ENST00000533487 TRIM16O95361 564 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 PRAMEF1O95521 474 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 ASMTLO95671 621 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 ILKQ13418 452 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 PTK6Q13882 451 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 KCNJ11Q14654 390 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 POU6F1Q14863 301 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 ATP13A5Q4VNC0 1218 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 PPM1JQ5JR12 505 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 PSAPL1Q6NUJ1 521 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 RD3Q7Z3Z2 195 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 GALNT13Q8IUC8 556 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 DDHD1Q8NEL9 900 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 GPBAR1Q8TDU6 330 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 ZNF514Q96K75 400 aaPredicted RBP20.77■□□□□ 0.92
VPS51-211ENST00000533487 C16orf45Q96MC5 204 aaPredicted RBP20.77■□□□□ 0.92
VPS51-211ENST00000533487 UCKL1Q9NWZ5 548 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 MOSPD1Q9UJG1 213 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 SUFUQ9UMX1 484 aa20.77■□□□□ 0.92
VPS51-211ENST00000533487 APOBEC2Q9Y235 224 aaKnown RBP20.77■□□□□ 0.92
VPS51-211ENST00000533487 ZFC3H1O60293 1989 aaKnown RBP20.77■□□□□ 0.92
VPS51-211ENST00000533487 CNOT1A5YKK6 2376 aaKnown RBP20.77■□□□□ 0.91
VPS51-211ENST00000533487 KLHL33A6NCF5 533 aa20.76■□□□□ 0.91
VPS51-211ENST00000533487 KCNJ13O60928 360 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms