RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LRRC45Q96CN5 670 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 PBKQ96KB5 322 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 VPS35Q96QK1 796 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 IL26Q9NPH9 171 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 EVA1BQ9NVM1 165 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 PYCARDQ9ULZ3 195 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 DOLKQ9UPQ8 538 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 ST14Q9Y5Y6 855 aa20.28■□□□□ 0.84
CCS-208ENST00000533244 GAPDHSO14556 408 aaPredicted RBP20.27■□□□□ 0.84
CCS-208ENST00000533244 PSMD3O43242 534 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 KIF5CO60282 957 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 DNAJC6O75061 913 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 SPAM1P38567 509 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 ADCY8P40145 1251 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 NR0B2Q15466 257 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 PYCR3Q53H96 274 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 CCDC157Q569K6 752 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 OGFOD3Q6PK18 319 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 PDCD7Q8N8D1 485 aaKnown RBP20.27■□□□□ 0.84
CCS-208ENST00000533244 ARL10Q8N8L6 244 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 PRELID2Q8N945 189 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 GLIS1Q8NBF1 620 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 BRSK1Q8TDC3 778 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 OR2M4Q96R27 311 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 C19orf43Q9BQ61 176 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 TMEM121BQ9BXQ6 578 aaPredicted RBP20.27■□□□□ 0.84
CCS-208ENST00000533244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.27■□□□□ 0.84
CCS-208ENST00000533244 TMPRSS11EQ9UL52 423 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 MSRB2Q9Y3D2 182 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 PCYT1BQ9Y5K3 369 aaPredicted RBP20.27■□□□□ 0.84
CCS-208ENST00000533244 ARL5AQ9Y689 179 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 AKAP13Q12802 2813 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 PLXNB3Q9ULL4 1909 aa20.27■□□□□ 0.84
CCS-208ENST00000533244 ACACBO00763 2458 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 ERI2A8K979 691 aaKnown RBP20.27■□□□□ 0.83
CCS-208ENST00000533244 IFNB1P01574 187 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 MSNP26038 577 aaKnown RBP20.27■□□□□ 0.83
CCS-208ENST00000533244 FDFT1P37268 417 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 RPIAP49247 311 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 GUSBP11Q6P575 273 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 TAF8Q7Z7C8 310 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 GALNT15Q8N3T1 639 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 KYQ8NBH2 561 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 GPR156Q8NFN8 814 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 GSDMCQ9BYG8 508 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 RMI1Q9H9A7 625 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 ETNK1Q9HBU6 452 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 HOMER3Q9NSC5 361 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 GPR34Q9UPC5 381 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 PKP3Q9Y446 797 aa20.27■□□□□ 0.83
CCS-208ENST00000533244 ASXL3Q9C0F0 2248 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 BUD23O43709 281 aaKnown RBP20.26■□□□□ 0.83
CCS-208ENST00000533244 ASMTLO95671 621 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 ETS1P14921 441 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 LPOP22079 712 aaPredicted RBP20.26■□□□□ 0.83
CCS-208ENST00000533244 E2F1Q01094 437 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 CTBSQ01459 385 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 CCDC173Q0VFZ6 552 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 ILF3Q12906 894 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCS-208ENST00000533244 SEMA5AQ13591 1074 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 ATP13A5Q4VNC0 1218 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 MARK2Q7KZI7 788 aaKnown RBP20.26■□□□□ 0.83
CCS-208ENST00000533244 PRUNE1Q86TP1 453 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 TMPRSS12Q86WS5 348 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 PHYKPLQ8IUZ5 450 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 IFI44Q8TCB0 444 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 SUDS3Q9H7L9 328 aaPredicted RBP20.26■□□□□ 0.83
CCS-208ENST00000533244 TRIM39Q9HCM9 518 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 PAK5Q9P286 719 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 ATXN10Q9UBB4 475 aa20.26■□□□□ 0.83
CCS-208ENST00000533244 TPRP12270 2363 aaKnown RBP20.26■□□□□ 0.83
CCS-208ENST00000533244 ARHGEF17Q96PE2 2063 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 MYLKQ15746 1914 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 GLYATL1P3A0A0U1RQE8 302 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 C2orf81A6NN90 581 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 GPR89AB7ZAQ6 455 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 CES2O00748 559 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 STX7O15400 261 aaKnown RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 NUAK1O60285 661 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 NOBOXO60393 691 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 SUN1O94901 812 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 SLC25A14O95258 325 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 GPR89BP0CG08 455 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 ZNF140P52738 457 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 INSM1Q01101 510 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 LRP8Q14114 963 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 PTPRCAPQ14761 206 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 CCNI2Q6ZMN8 369 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 ADGRG6Q86SQ4 1221 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 C17orf82Q86X59 251 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 GALNT13Q8IUC8 556 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 CACTIN-AS1Q8N1I8 211 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 TAB3Q8N5C8 712 aaPredicted RBP20.25■□□□□ 0.83
CCS-208ENST00000533244 CCDC89Q8N998 374 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 FAM46DQ8NEK8 389 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 GATA6Q92908 595 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 NAT6Q93015 286 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 OSBPL9Q96SU4 736 aa20.25■□□□□ 0.83
CCS-208ENST00000533244 SPATS2LQ9NUQ6 558 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms