RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SFRP1Q8N474 314 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF614Q8N883 585 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 OR2T34Q8NGX1 318 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 OR2T3Q8NH03 318 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ASZ1Q8WWH4 475 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CLP1Q92989 425 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PPM1MQ96MI6 270 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PAIP1Q9H074 479 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF395Q9H8N7 513 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 INTS10Q9NVR2 710 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 RHBDL2Q9NX52 303 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC7A8Q9UHI5 535 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 TAF1P21675 1872 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 KRT8P05787 483 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PROZP22891 400 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 POLR2JP52435 117 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 MRPS15P82914 257 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 INO80DQ53TQ3 878 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 FGD3Q5JSP0 725 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ZDHHC20Q5W0Z9 365 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 KRT78Q8N1N4 520 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ITCHQ96J02 903 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 NOL11Q9H8H0 719 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 IPPKQ9H8X2 491 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 WASF2Q9Y6W5 498 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CCDC162PA2VCL2 907 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC22A2O15244 555 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CST1P01037 141 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 UROSP10746 265 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PTGER3P43115 390 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ACTR3P61158 418 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 C1DQ13901 141 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ARHGAP36Q6ZRI8 547 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CTU1Q7Z7A3 348 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 C1QTNF3-AMACRE9PGA6 284 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 NEDD8-MDP1E9PL57 170 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ARHGEF9O43307 516 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 EFCAB14O75071 495 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 IL1BP01584 269 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ACADMP11310 421 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PABPC1P11940 636 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CXCR2P25025 360 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 RPS24P62847 133 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 C16orf72Q14CZ0 275 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 TAF1AQ15573 450 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 SLC9B1Q4ZJI4 515 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 MTX3Q5HYI7 312 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CPNE9Q8IYJ1 553 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ZBTB2Q8N680 514 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 PROX1Q92786 737 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 ABHD8Q96I13 439 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 TSSK3Q96PN8 268 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 CIB1Q99828 191 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 KRCC1Q9NPI7 259 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
PCDHA3-202ENST00000532566 C9IYK1 514 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ELFN1P0C7U0 828 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 RPL3P39023 403 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 GJA9P57773 515 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 RFTN1Q14699 578 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 NCF4Q15080 339 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ATAD3BQ5T9A4 648 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 GPR156Q8NFN8 814 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 GPR22Q99680 433 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 CPQQ9Y646 472 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 A0A1W2PQ67 120 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF252P-AS1Q0IIN9 211 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 REP15Q6BDI9 236 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 MAMDC4Q6UXC1 1216 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 RD3Q7Z3Z2 195 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF599Q96NL3 588 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 C1QTNF7Q9BXJ2 289 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 LRTM1Q9HBL6 345 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ZNF490Q9ULM2 529 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 LRATO95237 230 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 AHSGP02765 367 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 OLIG2Q13516 323 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 TRIM25Q14258 630 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 TCAIMQ8N3R3 496 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 ARL14EPQ8N8R7 260 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 CAPNS2Q96L46 248 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 DGCR6LQ9BY27 220 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 COMMD3-BMI1R4GMX3 469 aa15.23■□□□□ 0.03
PCDHA3-202ENST00000532566 H3BN98 237 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 PIP5K1BO14986 540 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 INHAP05111 366 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 HSPA7P48741 367 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 TOP3AQ13472 1001 aaPredicted RBP15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 BLMHQ13867 455 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 IL23RQ5VWK5 629 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 FAM47BQ8NA70 645 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 OR13C4Q8NGS5 318 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 MFSD1Q9H3U5 465 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 POLR1BQ9H9Y6 1135 aa15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 FCF1Q9Y324 198 aaKnown RBP15.22■□□□□ 0.03
PCDHA3-202ENST00000532566 NWD2Q9ULI1 1742 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms