RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 H3BM21 787 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 GDF9O60383 454 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 SRP72O76094 671 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 SLC25A14O95258 325 aaPredicted RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 RASGRP1O95267 797 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 ASMTLO95671 621 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 ITGALP20701 1170 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 MC4RP32245 332 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 BLKP51451 505 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 PPARDQ03181 441 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 EIF2B5Q13144 721 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 ZNF542PQ5EBM4 170 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 DNAJC21Q5F1R6 531 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 DUPD1Q68J44 220 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 TRIM74Q86UV6 250 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 NOA1Q8NC60 698 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 GDAP1Q8TB36 358 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 BTN2A2Q8WVV5 523 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 COX14Q96I36 57 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 VPS35Q96QK1 796 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 ASB8Q9H765 288 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 MRM3Q9HC36 420 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 DNAAF2Q9NVR5 837 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 CNOT6Q9ULM6 557 aaKnown RBP22.11■■□□□ 1.13
LRRK1-208ENST00000532029 MYLKQ15746 1914 aa22.11■■□□□ 1.13
LRRK1-208ENST00000532029 VPS13AQ96RL7 3174 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 ADAMTS9Q9P2N4 1935 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.1■■□□□ 1.13
LRRK1-208ENST00000532029 H7C0S8 307 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 GAPDHSO14556 408 aaPredicted RBP22.1■■□□□ 1.13
LRRK1-208ENST00000532029 CDX4O14627 284 aaPredicted RBP22.1■■□□□ 1.13
LRRK1-208ENST00000532029 TNFRSF10CO14798 259 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A9O60656 530 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 CSF2P04141 144 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A6P19224 532 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A1P22309 533 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A4P22310 534 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A3P35503 534 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A5P35504 534 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 RXRGP48443 463 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 SRP54P61011 504 aaKnown RBP22.1■■□□□ 1.13
LRRK1-208ENST00000532029 XIAPP98170 497 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 IL9RQ01113 521 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 PEX6Q13608 980 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 RD3Q7Z3Z2 195 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 HID1Q8IV36 788 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 PHACTR4Q8IZ21 702 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 PDIK1LQ8N165 341 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 MPP5Q8N3R9 675 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 TSACCQ96A04 125 aaPredicted RBP22.1■■□□□ 1.13
LRRK1-208ENST00000532029 TBATAQ96M53 351 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 KIFC1Q9BW19 673 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 SLC13A1Q9BZW2 595 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A7Q9HAW7 530 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A10Q9HAW8 530 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 UGT1A8Q9HAW9 530 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 FGF22Q9HCT0 170 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 TM7SF3Q9NS93 570 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 SLC2A6Q9UGQ3 507 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 SOX13Q9UN79 622 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 TMEM98Q9Y2Y6 226 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 MAD1L1Q9Y6D9 718 aa22.1■■□□□ 1.13
LRRK1-208ENST00000532029 MAGEB16A2A368 324 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 C4orf47A7E2U8 309 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 TNFP01375 233 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ZNF883P0CG24 379 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 NME1P15531 152 aaKnown RBP22.09■■□□□ 1.13
LRRK1-208ENST00000532029 JUNDP17535 347 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 PSMA3P25788 255 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 MAGEA3P43357 314 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ARL4CP56559 192 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 HNRNPKP61978 463 aaKnown RBP eCLIP22.09■■□□□ 1.13
LRRK1-208ENST00000532029 PRAMEP78395 509 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ARHGAP8P85298 464 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 SLC7A5Q01650 507 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 NFATC2Q13469 925 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ALG11Q2TAA5 492 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 UAP1L1Q3KQV9 507 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 GLE1Q53GS7 698 aaKnown RBP22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ZRANB3Q5FWF4 1079 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 STPG1Q5TH74 334 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 SNX20Q7Z614 316 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 OR13J1Q8NGT2 312 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 OR1E3Q8WZA6 343 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 HDAC10Q969S8 669 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ULK4Q96C45 1275 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 ZNF778Q96MU6 729 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 SUDS3Q9H7L9 328 aaPredicted RBP22.09■■□□□ 1.13
LRRK1-208ENST00000532029 L2HGDHQ9H9P8 463 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 CYP4F12Q9HCS2 524 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 SMOXQ9NWM0 555 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 VPS18Q9P253 973 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 APOBEC3BQ9UH17 382 aaKnown RBP22.09■■□□□ 1.13
LRRK1-208ENST00000532029 CRLS1Q9UJA2 301 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 CACNA1EQ15878 2313 aa22.09■■□□□ 1.13
LRRK1-208ENST00000532029 PRSS38A1L453 326 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 CEACAM5P06731 702 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 EPHA8P29322 1005 aaPredicted RBP22.08■■□□□ 1.13
LRRK1-208ENST00000532029 ARSDP51689 593 aa22.08■■□□□ 1.13
LRRK1-208ENST00000532029 HK3P52790 923 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms