RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 YTHDF3Q7Z739 585 aaKnown RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 GLRX5Q86SX6 157 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 CEP57Q86XR8 500 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 NRROSQ86YC3 692 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 ANKRD13BQ86YJ7 626 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 CNGA4Q8IV77 575 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 OR8H3Q8N146 312 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 RBM15BQ8NDT2 890 aaKnown RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 OR10S1Q8NGN2 331 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 OR1J2Q8NGS2 313 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 CFAP61Q8NHU2 1237 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 DDB2Q92466 427 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 OTULINQ96BN8 352 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 PTERQ96BW5 349 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 RHBDF1Q96CC6 855 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 COQ8BQ96D53 544 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 GRAMD2BQ96HH9 432 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 METTL2AQ96IZ6 378 aaKnown RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 HARBI1Q96MB7 349 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 JAKMIP1Q96N16 626 aaKnown RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 ZNF830Q96NB3 372 aaPredicted RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 CDRT15Q96T59 188 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 NAA11Q9BSU3 229 aaPredicted RBP2.99□□□□□ -1.93
CD44-234ENST00000531873 RTN4RQ9BZR6 473 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 SEMA4CQ9C0C4 833 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 SPATC1LQ9H0A9 340 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 TASP1Q9H6P5 420 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 DNAJC18Q9H819 358 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 ZWILCHQ9H900 591 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 OR14J1Q9UGF5 321 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 AMACRQ9UHK6 382 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 ZNHIT2Q9UHR6 403 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 TINAGQ9UJW2 476 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 OSGIN1Q9UJX0 560 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 RCOR1Q9UKL0 485 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 ZMYM2Q9UBW7 1377 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 CACNA1IQ9P0X4 2223 aa2.99□□□□□ -1.93
CD44-234ENST00000531873 TMEM272A0A1B0GTI8 110 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 A0A1W2PPM1 405 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 KANSL1LA0AUZ9 987 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 KCNU1A8MYU2 1149 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 KDM4EB2RXH2 506 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 H0Y626 953 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 M0QZ24 198 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 PLPP2O43688 288 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 RECQL5O94762 991 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 MTA2O94776 668 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 TOMM70O94826 608 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SOX30O94993 753 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 NDUFB8O95169 186 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 CCDC175P0C221 793 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 CD58P19256 250 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 TLX1P31314 330 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 HNRNPH1P31943 449 aaKnown RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 CCR10P46092 362 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 RFX5P48382 616 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 CSE1LP55060 971 aaKnown RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 ST3GAL1Q11201 340 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 HNF4GQ14541 408 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 HYAL4Q2M3T9 481 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 ATP13A5Q4VNC0 1218 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 DCAF6Q58WW2 860 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SLC10A5Q5PT55 438 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 DCAF12L2Q5VW00 463 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 CST9LP1Q5W188 147 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 GGNBP1Q5YKI7 109 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SIGIRRQ6IA17 410 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 DHRS7BQ6IAN0 325 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 TMEM211Q6ICI0 200 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 LCN10Q6JVE6 187 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 PAPD4Q6PIY7 484 aaKnown RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 PARM1Q6UWI2 310 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SHFQ7M4L6 423 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 CACNA2D4Q7Z3S7 1137 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 HAUS6Q7Z4H7 955 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 LDB1Q86U70 411 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 PRIMA1Q86XR5 153 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 ZNF595Q8IYB9 648 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 BEST3Q8N1M1 668 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 AADATQ8N5Z0 425 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 PI4KAP1Q8N8J0 262 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 OR2AK2Q8NG84 335 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 GOT1L1Q8NHS2 421 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 GSDMBQ8TAX9 411 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 HM13Q8TCT9 377 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 TAS1R2Q8TE23 839 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 TEKT4Q8WW24 435 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 TRIB2Q92519 343 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 MRPS27Q92552 414 aaKnown RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 APBB2Q92870 758 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 ATP6V1E2Q96A05 226 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 ZFYVE19Q96K21 471 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SPATA17Q96L03 361 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 CFAP57Q96MR6 1250 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 DACH2Q96NX9 599 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 GPATCH1Q9BRR8 931 aaKnown RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 DESI2Q9BSY9 194 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 GOLPH3LQ9H4A5 285 aa2.98□□□□□ -1.93
CD44-234ENST00000531873 SIRT3Q9NTG7 399 aaPredicted RBP2.98□□□□□ -1.93
CD44-234ENST00000531873 ZBTB40Q9NUA8 1239 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms