RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ADNPQ9H2P0 1102 aa15.69■□□□□ 0.1
CHMP4A-204ENST00000530996 OSGEPL1Q9H4B0 414 aa15.69■□□□□ 0.1
CHMP4A-204ENST00000530996 VPS18Q9P253 973 aa15.69■□□□□ 0.1
CHMP4A-204ENST00000530996 PPIL1Q9Y3C6 166 aa15.69■□□□□ 0.1
CHMP4A-204ENST00000530996 B4E171 279 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 MYO1FO00160 1098 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 MATN3O15232 486 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 SUV39H1O43463 412 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 FZD6O60353 706 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 EML2O95834 649 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 TSPAN7P41732 249 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 TLE1Q04724 770 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 GALNT2Q10471 571 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 IFI16Q16666 785 aaKnown RBP15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 CEACAM20Q6UY09 585 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 NLGN4XQ8N0W4 816 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 TEX26Q8N6G2 289 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 CCNYQ8ND76 341 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 NLGN4YQ8NFZ3 816 aaPredicted RBP15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 CCHCR1Q8TD31 782 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 SH3KBP1Q96B97 665 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 COX14Q96I36 57 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 HERPUD2Q9BSE4 406 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 PCDH9Q9HC56 1237 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 PKD2L2Q9NZM6 624 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 OAS3Q9Y6K5 1087 aaKnown RBP15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 UNC13CQ8NB66 2214 aa15.68■□□□□ 0.1
CHMP4A-204ENST00000530996 MTA2O94776 668 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 HLA-DQB2P05538 268 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 CES1P23141 567 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 TPM4P67936 248 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 DPYSL3Q14195 570 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 PLA2G4EQ3MJ16 856 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 ZNF569Q5MCW4 686 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 ALS2CLQ60I27 953 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 UNC5BQ8IZJ1 945 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 ZNF564Q8TBZ8 553 aaPredicted RBP15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 LRRN4Q8WUT4 740 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 MAML1Q92585 1016 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 RTP4Q96DX8 246 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 CATSPER2Q96P56 530 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 SARS2Q9NP81 518 aaKnown RBP15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 TMEM63CQ9P1W3 806 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 TBC1D29Q9UFV1 150 aa15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 BZW2Q9Y6E2 419 aaKnown RBP15.67■□□□□ 0.1
CHMP4A-204ENST00000530996 HECTD1Q9ULT8 2610 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CAPN5O15484 640 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 DNAJC6O75061 913 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 MX2P20592 715 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CD86P42081 329 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 EPHA4P54764 986 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 RPL26P61254 145 aaKnown RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CDC20Q12834 499 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 SQSTM1Q13501 440 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 ANKRD20A8PQ5CZ79 823 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 ALG1LQ6GMV1 187 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 WDR74Q6RFH5 385 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CRTC3Q6UUV7 619 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 MAP7D3Q8IWC1 876 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 TRIM48Q8IWZ4 208 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 C9orf43Q8TAL5 461 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CPLX3Q8WVH0 158 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 RNF31Q96EP0 1072 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 ZNF670Q9BS34 389 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 EFHD1Q9BUP0 239 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 SPATA16Q9BXB7 569 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 FAM83DQ9H4H8 585 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 ARFGAP3Q9NP61 516 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 CTTNBP2NLQ9P2B4 639 aa15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 RPL26L1Q9UNX3 145 aaKnown RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 PCYT1BQ9Y5K3 369 aaPredicted RBP15.66■□□□□ 0.1
CHMP4A-204ENST00000530996 KIR2DS5A0A0G2JLQ3 304 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 A0A0G2JNG1 304 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 FADS2P1A8MWK0 482 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 KIR2DS3K7RE56 304 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 STK17BO94768 372 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 SERPING1P05155 500 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 CYP1A2P05177 515 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 F3P13726 295 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 CCNCP24863 283 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 MAP4P27816 1152 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 SPINT3P49223 89 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 GBE1Q04446 702 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 FOXM1Q08050 763 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 NIPAL4Q0D2K0 466 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 GALNT3Q14435 633 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 KIR2DS5Q14953 304 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 PAFAH1B3Q15102 231 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 INSCQ1MX18 579 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 SKIDA1Q1XH10 827 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 HENMT1Q5T8I9 393 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 HGSNATQ68CP4 663 aa15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 CAVIN1Q6NZI2 390 aaKnown RBP15.65■□□□□ 0.1
CHMP4A-204ENST00000530996 C16orf46Q6P387 395 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms