RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZACNQ401N2 412 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 WDR44Q5JSH3 913 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DTX3Q8N9I9 347 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 FNDC5Q8NAU1 212 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TXNDC5Q8NBS9 432 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 APPL2Q8NEU8 664 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 OR4M2Q8NGB6 313 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 MBOAT4Q96T53 435 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 LXNQ9BS40 222 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 NTPCRQ9BSD7 190 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ROGDIQ9GZN7 287 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ERVMER34-1Q9H9K5 563 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 EIF2B3Q9NR50 452 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CHRAC1Q9NRG0 131 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF358Q9NW07 568 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DIMT1Q9UNQ2 313 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 UBR3Q6ZT12 1888 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 KRT87PA6NCN2 255 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 GOLGA8JA6NMD2 632 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 A8MX80 341 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TARM1B6A8C7 271 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 H3BQ06 376 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 UBXN8O00124 270 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ARHGEF9O43307 516 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 MED26O95402 600 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ALPPP05187 535 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 PSKH1P11801 424 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ATF6P18850 670 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 UQCRC1P31930 480 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TGFBR2P37173 567 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 RGS7P49802 495 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 NCS1P62166 190 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 KCNT1Q5JUK3 1230 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 VARS2Q5ST30 1063 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TPRG1LQ5T0D9 272 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SCARA5Q6ZMJ2 495 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DBX2Q6ZNG2 339 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DPY19L3Q6ZPD9 716 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 FAM160B2Q86V87 743 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 PQLC3Q8N755 202 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 KCTD6Q8NC69 237 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 SLC30A3Q99726 388 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 HAPLN2Q9GZV7 340 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 DUSP21Q9H596 190 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 NTN4Q9HB63 628 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 FARSBQ9NSD9 589 aaKnown RBP8.1□□□□□ -1.11
CSDE1-214ENST00000530886 RAPGEFL1Q9UHV5 662 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 TBC1D24Q9ULP9 559 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 PEX16Q9Y5Y5 336 aa8.1□□□□□ -1.11
CSDE1-214ENST00000530886 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 H3BUI4 141 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TBC1D4O60343 1298 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TRUB2O95900 331 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 IFNA16P05015 189 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 RBP1P09455 135 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PSMA2P25787 234 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 HLA-DMAP28067 261 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 GZMKP49863 264 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TRAF3Q13114 568 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 NFE2L1Q14494 772 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZBTB37Q5TC79 503 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF691Q5VV52 312 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 STYK1Q6J9G0 422 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TMEM65Q6PI78 240 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PADI6Q6TGC4 694 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PLD3Q8IV08 490 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CLEC4FQ8N1N0 589 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SDHCQ99643 169 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 WDR11Q9BZH6 1224 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 POLR3BQ9NW08 1133 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CYTH4Q9UIA0 394 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 NDUFAF1Q9Y375 327 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 PSAT1Q9Y617 370 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ANKRD31Q8N7Z5 1873 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 KCNN4O15554 427 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 TLL1O43897 1013 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ARP10275 920 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ATF4P18848 351 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SPRP35270 261 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ST13P50502 369 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 MYL6P60660 151 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CD47Q08722 323 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 COX10Q12887 443 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 EFR3AQ14156 821 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 LRRC26Q2I0M4 334 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZC3H12BQ5HYM0 836 aaKnown RBP8.09□□□□□ -1.11
CSDE1-214ENST00000530886 SDE2Q6IQ49 451 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CES5AQ6NT32 575 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC190Q86UF4 302 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 GPALPP1Q8IXQ4 340 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 ZMIZ2Q8NF64 920 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 STYXQ8WUJ0 223 aa8.09□□□□□ -1.11
CSDE1-214ENST00000530886 BIRC7Q96CA5 298 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms