RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 POLR1BQ9H9Y6 1135 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 VPS18Q9P253 973 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 LRIT1Q9P2V4 623 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 APPL1Q9UKG1 709 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 RALYQ9UKM9 306 aaKnown RBP18.68■□□□□ 0.58
PCNX3-203ENST00000530174 SATB2Q9UPW6 733 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 SPO11Q9Y5K1 396 aa18.68■□□□□ 0.58
PCNX3-203ENST00000530174 PCYT1BQ9Y5K3 369 aaPredicted RBP18.68■□□□□ 0.58
PCNX3-203ENST00000530174 LOC285095A0A1B0GVY8 99 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 D6RAR5 112 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 AURKAO14965 403 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 NUDT21O43809 227 aaKnown RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 DNAJC6O75061 913 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 ECEL1O95672 775 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 PYGMP11217 842 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 PNLIPP16233 465 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 RBL1P28749 1068 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 ACTN2P35609 894 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 ACTR1BP42025 376 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 DCDC1P59894 354 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 ACTR1AP61163 376 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 SPRED1Q7Z699 444 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 C17orf82Q86X59 251 aaPredicted RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 TXLNBQ8N3L3 684 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 SNIP1Q8TAD8 396 aaKnown RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 HNRNPLLQ8WVV9 542 aaKnown RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 PATE1Q8WXA2 126 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 FGF11Q92914 225 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 MRGPRX2Q96LB1 330 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 SRPK1Q96SB4 655 aaKnown RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 SPATA16Q9BXB7 569 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 RAD18Q9NS91 495 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 NFKBIL1Q9UBC1 381 aaPredicted RBP18.67■□□□□ 0.58
PCNX3-203ENST00000530174 RSPH14Q9UHP6 348 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 TRHDEQ9UKU6 1024 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 AMFRQ9UKV5 643 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 LHX6Q9UPM6 363 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 LAMA5O15230 3695 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 KIF26BQ2KJY2 2108 aa18.67■□□□□ 0.58
PCNX3-203ENST00000530174 ADAMTS20P59510 1910 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 DXOO77932 396 aaKnown RBP18.66■□□□□ 0.58
PCNX3-203ENST00000530174 EIF2S3P41091 472 aaKnown RBP18.66■□□□□ 0.58
PCNX3-203ENST00000530174 CETN2P41208 172 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 CHRNA4P43681 627 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 COL28A1Q2UY09 1125 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 SIRPB2Q5JXA9 342 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 ZNF569Q5MCW4 686 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 B3GNT8Q7Z7M8 397 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 CDKL3Q8IVW4 592 aaPredicted RBP18.66■□□□□ 0.58
PCNX3-203ENST00000530174 LSMEM2Q8N112 164 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 NAGSQ8N159 534 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 SLC25A41Q8N5S1 370 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 IPMKQ8NFU5 416 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 FAM118BQ9BPY3 351 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 ZNHIT2Q9UHR6 403 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 PRKAB1Q9Y478 270 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 UNC13CQ8NB66 2214 aa18.66■□□□□ 0.58
PCNX3-203ENST00000530174 ZFC3H1O60293 1989 aaKnown RBP18.65■□□□□ 0.58
PCNX3-203ENST00000530174 SCN8AQ9UQD0 1980 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 PMS2P1A4D2B8 440 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 FTCDO95954 541 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 EPOP01588 193 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 BPIP17213 487 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 TNNT3P45378 269 aaPredicted RBP18.65■□□□□ 0.58
PCNX3-203ENST00000530174 EIF3EP60228 445 aaKnown RBP18.65■□□□□ 0.58
PCNX3-203ENST00000530174 MPP3Q13368 585 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 PEX6Q13608 980 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 LRP8Q14114 963 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ZNF438Q7Z4V0 828 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ARL14Q8N4G2 192 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 TRAM1L1Q8N609 369 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ZSCAN5AQ9BUG6 496 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 FOXP3Q9BZS1 431 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 GBA3Q9H227 469 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 BPIFA1Q9NP55 256 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ARFGAP3Q9NP61 516 aa18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ATXN7L1Q9ULK2 861 aaPredicted RBP18.65■□□□□ 0.58
PCNX3-203ENST00000530174 PACSIN2Q9UNF0 486 aaPredicted RBP18.65■□□□□ 0.58
PCNX3-203ENST00000530174 ITPR1Q14643 2758 aa18.64■□□□□ 0.58
PCNX3-203ENST00000530174 RHPN2P1A8MT19 583 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 TJP3O95049 919 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 SLC25A14O95258 325 aaPredicted RBP18.64■□□□□ 0.57
PCNX3-203ENST00000530174 RBP3P10745 1247 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 B4GALNT1Q00973 533 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 SLC1A5Q15758 541 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 ZNF648Q5T619 568 aaPredicted RBP18.64■□□□□ 0.57
PCNX3-203ENST00000530174 CHST15Q7LFX5 561 aaPredicted RBP18.64■□□□□ 0.57
PCNX3-203ENST00000530174 UBL4BQ8N7F7 174 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 PRR11Q96HE9 360 aaPredicted RBP18.64■□□□□ 0.57
PCNX3-203ENST00000530174 ZNF578Q96N58 590 aaPredicted RBP18.64■□□□□ 0.57
PCNX3-203ENST00000530174 FERMT1Q9BQL6 677 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 GORASP1Q9BQQ3 440 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 FSD1LQ9BXM9 530 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 TRABDQ9H4I3 376 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 RMI1Q9H9A7 625 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 EPB41L5Q9HCM4 733 aa18.64■□□□□ 0.57
PCNX3-203ENST00000530174 ASCL3Q9NQ33 180 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms