RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 PKP3Q9Y446 797 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 OAS3Q9Y6K5 1087 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 U3KQA8 63 aa12.58□□□□□ -0.4
CCDC90B-216ENST00000529856 GOLGA4Q13439 2230 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 C2orf81A6NN90 581 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ERI2A8K979 691 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 CES2O00748 559 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 STX7O15400 261 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 BUD23O43709 281 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 RFPL3O75679 317 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 SLC25A14O95258 325 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ASMTLO95671 621 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ZSCAN5DPP0CG00 497 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 CDK4P11802 303 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 MYF5P13349 255 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 LPOP22079 712 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 RPL22P35268 128 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ADCY8P40145 1251 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 KCNJ1P48048 391 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 DUSP3P51452 185 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ILKQ13418 452 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 TCEA2Q15560 299 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 PYCR3Q53H96 274 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 CCDC157Q569K6 752 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 C6orf132Q5T0Z8 1188 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 TAF8Q7Z7C8 310 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 CCL4L1Q8NHW4 92 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ACTRT1Q8TDG2 376 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 COG1Q8WTW3 980 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 GLMNQ92990 594 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 GLYATL1Q969I3 302 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 NAP1L3Q99457 506 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 TRIM39Q9HCM9 518 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 ARL5AQ9Y689 179 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
CCDC90B-216ENST00000529856 EME2A4GXA9 379 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 FAM221BA6H8Z2 402 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 DNAJC6O75061 913 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SUN1O94901 812 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 CRTAMO95727 393 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 TPH1P17752 444 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SPAM1P38567 509 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 GNG11P61952 73 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 CTBSQ01459 385 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SEMA5AQ13591 1074 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 PTPRCAPQ14761 206 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 NR0B2Q15466 257 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 CHRNA6Q15825 494 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 ATP13A5Q4VNC0 1218 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 OGFOD3Q6PK18 319 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 DHRS13Q6UX07 377 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 C4orf22Q6V702 233 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 MARK2Q7KZI7 788 aaKnown RBP12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 GSTA5Q7RTV2 222 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 LINC00523Q86TU6 105 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 NRROSQ86YC3 692 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SLC35F3Q8IY50 421 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 OR4K2Q8NGD2 314 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 VPS35Q96QK1 796 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 C19orf43Q9BQ61 176 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SCNM1Q9BWG6 230 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 AP1M1Q9BXS5 423 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 GSDMCQ9BYG8 508 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 RMI1Q9H9A7 625 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 RAB6BQ9NRW1 208 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 EVA1BQ9NVM1 165 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 TMPRSS11EQ9UL52 423 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 GPR34Q9UPC5 381 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 GPSM3Q9Y4H4 160 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 KCTD3Q9Y597 815 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 ST14Q9Y5Y6 855 aa12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCDC90B-216ENST00000529856 SPEGQ15772 3267 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 GLYATL1P3A0A0U1RQE8 302 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 E7EVH7 732 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF185O15231 689 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 LDB2O43679 373 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 NUAK1O60285 661 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 GP1BAP07359 652 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 TCP1P17987 556 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 SPINK2P20155 84 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 RPIAP49247 311 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 LMAN1P49257 510 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 PDE1BQ01064 536 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 E2F1Q01094 437 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ILF3Q12906 894 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 CYP1B1Q16678 543 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ZNF648Q5T619 568 aaPredicted RBP12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 TTC27Q6P3X3 843 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 FAM151BQ6UXP7 276 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 TMPRSS7Q7RTY8 843 aa12.55□□□□□ -0.4
CCDC90B-216ENST00000529856 ADGRG6Q86SQ4 1221 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms