RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 NKX3-2P78367 333 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CCINQ13939 588 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 POLD3Q15054 466 aaPredicted RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 PUM3Q15397 648 aaKnown RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 TMEM164Q5U3C3 297 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CATSPER4Q7RTX7 472 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 TMEM174Q8WUU8 243 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SHC3Q92529 594 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 NCLNQ969V3 563 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 PDXPQ96GD0 296 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 C19orf43Q9BQ61 176 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SLC6A17Q9H1V8 727 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 USP22Q9UPT9 525 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 AGTPBP1Q9UPW5 1226 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 TLR6Q9Y2C9 796 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CYP2D7A0A087X1C5 515 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 C17orf113A0A1B0GUU1 675 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CXorf49A8MYA2 514 aaPredicted RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SGK1O00141 431 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 B4GAT1O43505 415 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CCNE2O96020 404 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 ALBP02768 609 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 IL10P22301 178 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 RAP1GAPP47736 663 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SEPHS1P49903 392 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SERPINB9P50453 376 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 MAPK12P53778 367 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 RPL10AP62906 217 aaKnown RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 Q3ZCU0 254 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 ZBTB37Q5TC79 503 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 ATF7IP2Q5U623 682 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 GARNL3Q5VVW2 1013 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 C8orf82Q6P1X6 216 aaPredicted RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 KIAA1324Q6UXG2 1013 aaKnown RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 DPY19L3Q6ZPD9 716 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CANT1Q8WVQ1 401 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 LPPQ93052 612 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SH2D3AQ9BRG2 576 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 REEP2Q9BRK0 252 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CASS4Q9NQ75 786 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 TLR9Q9NR96 1032 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 SNX15Q9NRS6 342 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 FAM105AQ9NUU6 356 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 WARS2Q9UGM6 360 aaKnown RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 CYB5R1Q9UHQ9 305 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 TRMT6Q9UJA5 497 aaKnown RBP7.96□□□□□ -1.14
C11orf88-203ENST00000529167 ANAPC2Q9UJX6 822 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 STOML2Q9UJZ1 356 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 JAG2Q9Y219 1238 aa7.96□□□□□ -1.14
C11orf88-203ENST00000529167 HEATR9A2RTY3 570 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 AQP12BA6NM10 295 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 NRP1O14786 923 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 AXIN1O15169 862 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 XYLBO75191 536 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 GLRA3O75311 464 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 MTHFD1P11586 935 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 AKR1B1P15121 316 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 ITGA2P17301 1181 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 ELK4P28324 431 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 FMO4P31512 558 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 CD68P34810 354 aaPredicted RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 RPL22P35268 128 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 GGT5P36269 586 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 RPS5P46782 204 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 ARFIP1P53367 373 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PSME3P61289 254 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PRKCDQ05655 676 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 SCRN3Q0VDG4 424 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 FAPQ12884 760 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 STARD3Q14849 445 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 NXNL2Q5VZ03 156 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 FCRLBQ6BAA4 426 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PLEKHM3Q6ZWE6 761 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 STRADAQ7RTN6 431 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 MRPL10Q7Z7H8 261 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 AMIGO1Q86WK6 493 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 AQP12AQ8IXF9 295 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 CDH26Q8IXH8 852 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 SLFN12Q8IYM2 578 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 UNC5BQ8IZJ1 945 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 TAGAPQ8N103 731 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 ZNF781Q8N8C0 355 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 FAM83FQ8NEG4 500 aaPredicted RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 BLOC1S5Q8TDH9 187 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 KCTD4Q8WVF5 259 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 KLHL6Q8WZ60 621 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 SMG7Q92540 1137 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 FATE1Q969F0 183 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 TESCQ96BS2 214 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 NXNL1Q96CM4 212 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 YIPF6Q96EC8 236 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 NTPCRQ9BSD7 190 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 ROGDIQ9GZN7 287 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 NXF2Q9GZY0 626 aaKnown RBP7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PPA2Q9H2U2 334 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PCIF1Q9H4Z3 704 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 PLAC1Q9HBJ0 212 aa7.95□□□□□ -1.14
C11orf88-203ENST00000529167 TRPM5Q9NZQ8 1165 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms