RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TMEM71Q6P5X7 295 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 FAM129CQ86XR2 697 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 CCDC13Q8IYE1 715 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 IL22RA1Q8N6P7 574 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 FATE1Q969F0 183 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 COX14Q96I36 57 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 PKD2L2Q9NZM6 624 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 A8MU76 341 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 PYCARD-AS1I3L0S3 204 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 GYPCP04921 128 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 CD86P42081 329 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 SPINT3P49223 89 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC10A2Q12908 348 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 RAVER1Q8IY67 606 aaKnown RBP22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 PQLC3Q8N755 202 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC37A2Q8TED4 501 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 ADGRE3Q9BY15 652 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 DEF6Q9H4E7 631 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 STN1Q9H668 368 aaKnown RBP22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 TMEM9Q9P0T7 183 aa22.2■■□□□ 1.14
TRAPPC4-208ENST00000527680 EFCAB7A8K855 629 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 ANKRD66B4E2M5 251 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 KCNK1O00180 336 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 SNX2O60749 519 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 FASLGP48023 281 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 HHEXQ03014 270 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 NFATC2Q13469 925 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 MESDQ14696 234 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 QPCTQ16769 361 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 SFRP1Q8N474 314 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 MAK16Q9BXY0 300 aaKnown RBP22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 ASPSCR1Q9BZE9 553 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 OCIAD1Q9NX40 245 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 DTLQ9NZJ0 730 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 VPS18Q9P253 973 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 LCMT1Q9UIC8 334 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 KCNK6Q9Y257 313 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 HEY1Q9Y5J3 304 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 B3GALT1Q9Y5Z6 326 aa22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 OAS3Q9Y6K5 1087 aaKnown RBP22.19■■□□□ 1.14
TRAPPC4-208ENST00000527680 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 DUX1O43812 170 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 DNAJC6O75061 913 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 EML2O95834 649 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 TPM3P06753 285 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 FAM87AP0C7U9 286 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 THRAP10827 490 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 SFTPCP11686 197 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 ACP5P13686 325 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 WT1P19544 449 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 KDELR1P24390 212 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 CSF2RBP32927 897 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 TBR1Q16650 682 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 DCAF12Q5T6F0 453 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 KDELC2Q7Z4H8 507 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 NCSTNQ92542 709 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 RAPGEF5Q92565 580 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 NKD1Q969G9 470 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 PMEPA1Q969W9 287 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 SH3KBP1Q96B97 665 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 FAF2Q96CS3 445 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 HDAC11Q96DB2 347 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 RNF157Q96PX1 679 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 LYSMD1Q96S90 227 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 PACSIN1Q9BY11 444 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 RMI1Q9H9A7 625 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 CNOT6Q9ULM6 557 aaKnown RBP22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 PCDHGA3Q9Y5H0 932 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 SDK2Q58EX2 2172 aa22.18■■□□□ 1.14
TRAPPC4-208ENST00000527680 LRRD1A4D1F6 860 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 MAPK9P45984 424 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 KCNC4Q03721 635 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 AP1B1Q10567 949 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC18A3Q16572 532 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 ODF2Q5BJF6 829 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 IYDQ6PHW0 289 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC9B2Q86UD5 537 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 WDR24Q96S15 920 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 TBC1D29Q9UFV1 150 aa22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 PCYT1BQ9Y5K3 369 aaPredicted RBP22.17■■□□□ 1.14
TRAPPC4-208ENST00000527680 RGSL1A5PLK6 1076 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 FADS2P1A8MWK0 482 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 GRID2O43424 1007 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC2A4P14672 509 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 UGT1A3P35503 534 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 GALNT3Q14435 633 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 HENMT1Q5T8I9 393 aaKnown RBP22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 LYSMD3Q7Z3D4 306 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 CACNA2D3Q8IZS8 1091 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 DDA1Q9BW61 102 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 SPATA16Q9BXB7 569 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 ZFYVE1Q9HBF4 777 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 ARFGAP3Q9NP61 516 aa22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 SARS2Q9NP81 518 aaKnown RBP22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 ZNHIT6Q9NWK9 470 aaKnown RBP22.16■■□□□ 1.14
TRAPPC4-208ENST00000527680 AKR1B10O60218 316 aa22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 SLC25A14O95258 325 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC4-208ENST00000527680 MMP2P08253 660 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms