RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 ELF4Q99607 663 aaPredicted RBP16.53■□□□□ 0.24
SMCO4-204ENST00000527149 SPATA16Q9BXB7 569 aa16.53■□□□□ 0.24
SMCO4-204ENST00000527149 PHPT1Q9NRX4 125 aaPredicted RBP16.53■□□□□ 0.24
SMCO4-204ENST00000527149 TREX1Q9NSU2 369 aa16.53■□□□□ 0.24
SMCO4-204ENST00000527149 SMOXQ9NWM0 555 aa16.53■□□□□ 0.24
SMCO4-204ENST00000527149 SLC2A6Q9UGQ3 507 aa16.53■□□□□ 0.24
SMCO4-204ENST00000527149 SNX24Q9Y343 169 aa16.53■□□□□ 0.24
SMCO4-204ENST00000527149 OAS3Q9Y6K5 1087 aaKnown RBP16.53■□□□□ 0.24
SMCO4-204ENST00000527149 A0A1B0GTQ1 180 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 CCDC78A2IDD5 438 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 AGAP14A8MT82 685 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 CACNB4O00305 520 aaPredicted RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 PRAMEF1O95521 474 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 NME1P15531 152 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 THOP1P52888 689 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 SARNPP82979 210 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 ALG11Q2TAA5 492 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 MSS51Q4VC12 460 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 KHDC1Q4VXA5 237 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 PCID2Q5JVF3 399 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 PRAMEF14Q5SWL7 426 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 ARMC3Q5W041 872 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 C8orf74Q6P047 294 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 KANSL1Q7Z3B3 1105 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 PCGF5Q86SE9 256 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 CEP112Q8N8E3 955 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 OR1E3Q8WZA6 343 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 GLYATL1Q969I3 302 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 SIGLEC10Q96LC7 697 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 PWWP2AQ96N64 755 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 WDR83Q9BRX9 315 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 KIFC1Q9BW19 673 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 GTPBP2Q9BX10 602 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 CARD6Q9BX69 1037 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 GAREM1Q9H706 876 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 MRM3Q9HC36 420 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 DNAAF2Q9NVR5 837 aaKnown RBP16.52■□□□□ 0.24
SMCO4-204ENST00000527149 BFARQ9NZS9 450 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 SOX13Q9UN79 622 aa16.52■□□□□ 0.24
SMCO4-204ENST00000527149 INPP4BO15327 924 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 SRP72O76094 671 aaKnown RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 CER1O95813 267 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 FUCA1P04066 466 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 CEACAM5P06731 702 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 HADHAP40939 763 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 TMPRSS15P98073 1019 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 CBLBQ13191 982 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 PTK2BQ14289 1009 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 TRADDQ15628 312 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 AASDHQ4L235 1098 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 FNBP1LQ5T0N5 605 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 OXR1Q8N573 874 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 PPHLN1Q8NEY8 458 aaKnown RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 BTN2A2Q8WVV5 523 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 SCARF2Q96GP6 870 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 CDKN2AIPNLQ96HQ2 116 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 TBATAQ96M53 351 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 TRIM56Q9BRZ2 755 aaKnown RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 DPH5Q9H2P9 285 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 TCEAL2Q9H3H9 227 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 SUDS3Q9H7L9 328 aaPredicted RBP16.51■□□□□ 0.23
SMCO4-204ENST00000527149 CHRAC1Q9NRG0 131 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 WHRNQ9P202 907 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 APPL1Q9UKG1 709 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 SLC17A4Q9Y2C5 497 aa16.51■□□□□ 0.23
SMCO4-204ENST00000527149 SPEGQ15772 3267 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ZFC3H1O60293 1989 aaKnown RBP16.5■□□□□ 0.23
SMCO4-204ENST00000527149 TRBV5-4A0A0C4DH59 114 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 SMAPO00193 183 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 TNFRSF10CO14798 259 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A9O60656 530 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 BANF1O75531 89 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 CSF2P04141 144 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF883P0CG24 379 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A6P19224 532 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A1P22309 533 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A4P22310 534 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ARNTP27540 789 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 NMBRP28336 390 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 EPHA8P29322 1005 aaPredicted RBP16.5■□□□□ 0.23
SMCO4-204ENST00000527149 MC4RP32245 332 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 FOXN2P32314 431 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A3P35503 534 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A5P35504 534 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 LIMK1P53667 647 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 NFATC2Q13469 925 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 LAMB3Q13751 1172 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ZNF542PQ5EBM4 170 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 ZDHHC24Q6UX98 284 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 NLRP9Q7RTR0 991 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 RBFAQ8N0V3 343 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 OR56A4Q8NGH8 313 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 RAB17Q9H0T7 212 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A7Q9HAW7 530 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A10Q9HAW8 530 aa16.5■□□□□ 0.23
SMCO4-204ENST00000527149 UGT1A8Q9HAW9 530 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms