RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TRIM51Q9BSJ1 452 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 FRMD8Q9BZ67 464 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 IL22Q9GZX6 179 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 FGF22Q9HCT0 170 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 NLE1Q9NVX2 485 aaPredicted RBP12.84□□□□□ -0.35
SMPD1-202ENST00000526280 BFARQ9NZS9 450 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 KLQ9UEF7 1012 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 APPL1Q9UKG1 709 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 RIMKLBQ9ULI2 386 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 SLC17A4Q9Y2C5 497 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 DGKBQ9Y6T7 804 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 MYLKQ15746 1914 aa12.84□□□□□ -0.35
SMPD1-202ENST00000526280 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 H7C0S8 307 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 SLC30A4O14863 429 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TM4SF5O14894 197 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 AVILO75366 819 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 PIAS2O75928 621 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 RASGRP1O95267 797 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 FUCA1P04066 466 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 JUNDP17535 347 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 EPHA8P29322 1005 aaPredicted RBP12.83□□□□□ -0.36
SMPD1-202ENST00000526280 BLKP51451 505 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 HK3P52790 923 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 XIAPP98170 497 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 PEX6Q13608 980 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 SUZ12Q15022 739 aaKnown RBP12.83□□□□□ -0.36
SMPD1-202ENST00000526280 ATP13A5Q4VNC0 1218 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 PCID2Q5JVF3 399 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 IZUMO3Q5VZ72 239 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 KCTD16Q68DU8 428 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 FAM151BQ6UXP7 276 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 NLRP9Q7RTR0 991 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 KANSL1Q7Z3B3 1105 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TRIM74Q86UV6 250 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 HID1Q8IV36 788 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 PHACTR4Q8IZ21 702 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF398Q8TD17 642 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 OR1E3Q8WZA6 343 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 GLYATL1Q969I3 302 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 SCARF2Q96GP6 870 aaPredicted RBP12.83□□□□□ -0.36
SMPD1-202ENST00000526280 CDKN2AIPNLQ96HQ2 116 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 VPS35Q96QK1 796 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 XAB2Q9HCS7 855 aaKnown RBP12.83□□□□□ -0.36
SMPD1-202ENST00000526280 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TMPRSS11EQ9UL52 423 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TMEM98Q9Y2Y6 226 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 TCAF1Q9Y4C2 921 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 SPTBN4Q9H254 2564 aa12.83□□□□□ -0.36
SMPD1-202ENST00000526280 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 PRSS38A1L453 326 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 H3BM21 787 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 GOLGA8MH3BSY2 632 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 CCL22O00626 93 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 RAD51CO43502 376 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A9O60656 530 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SDC3O75056 442 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SRP72O76094 671 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SLC25A14O95258 325 aaPredicted RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 PRAMEF1O95521 474 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 TNFP01375 233 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A6P19224 532 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SDHBP21912 280 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A1P22309 533 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A4P22310 534 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 DGKAP23743 735 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 MGAT1P26572 445 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A3P35503 534 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A5P35504 534 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 MAGEA3P43357 314 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 POLD2P49005 469 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 CRADDP78560 199 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 MRPS25P82663 173 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 ITGA9Q13797 1035 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 RSPO4Q2I0M5 234 aaPredicted RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 TSTD2Q5T7W7 516 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 ARMC3Q5W041 872 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 RD3Q7Z3Z2 195 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 HOOK3Q86VS8 718 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 GATAD2AQ86YP4 633 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 RBFAQ8N0V3 343 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SLC25A45Q8N413 288 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 PPHLN1Q8NEY8 458 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 OR13J1Q8NGT2 312 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 PEX13Q92968 403 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 PDXPQ96GD0 296 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 TBATAQ96M53 351 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 ZNF778Q96MU6 729 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SERPINB12Q96P63 405 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 KIFC1Q9BW19 673 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 SLC13A1Q9BZW2 595 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 TCEAL2Q9H3H9 227 aaPredicted RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A7Q9HAW7 530 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A10Q9HAW8 530 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 UGT1A8Q9HAW9 530 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 TRIM39Q9HCM9 518 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 CYP4F12Q9HCS2 524 aa12.82□□□□□ -0.36
SMPD1-202ENST00000526280 MRPL40Q9NQ50 206 aaKnown RBP12.82□□□□□ -0.36
SMPD1-202ENST00000526280 CHRAC1Q9NRG0 131 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms