RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 TRABDQ9H4I3 376 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 MAGEE1Q9HCI5 957 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 PCDH12Q9NPG4 1184 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 ZDHHC18Q9NUE0 388 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 EVA1BQ9NVM1 165 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 HACD3Q9P035 362 aa17.23■□□□□ 0.35
CCS-204ENST00000526066 ANKRD36A6QL64 1941 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 PRAMEF26H0Y7S4 382 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 SDC3O75056 442 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 CYP2A6P11509 494 aaPredicted RBP17.22■□□□□ 0.35
CCS-204ENST00000526066 ACP1P24666 158 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 TNFRSF8P28908 595 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 NPY2RP49146 381 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 PLTPP55058 493 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 ELP6Q0PNE2 266 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 TAF1BQ53T94 588 aaPredicted RBP17.22■□□□□ 0.35
CCS-204ENST00000526066 KDM7AQ6ZMT4 941 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 DPPA4Q7L190 304 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 ZNF248Q8NDW4 579 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 FBXO25Q8TCJ0 367 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 ANKZF1Q9H8Y5 726 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 BFARQ9NZS9 450 aa17.22■□□□□ 0.35
CCS-204ENST00000526066 GOLGA8MH3BSY2 632 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 SPINT1O43278 529 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 PLRG1O43660 514 aaKnown RBP17.21■□□□□ 0.35
CCS-204ENST00000526066 C1QL1O75973 258 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 ALPPL2P10696 532 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 CTPS1P17812 591 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 VIPR1P32241 457 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 MMP12P39900 470 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 CARSP49589 748 aaKnown RBP17.21■□□□□ 0.35
CCS-204ENST00000526066 UCNP55089 124 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 ARL4CP56559 192 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 PCBP4P57723 403 aaKnown RBP17.21■□□□□ 0.35
CCS-204ENST00000526066 INSM1Q01101 510 aaPredicted RBP17.21■□□□□ 0.35
CCS-204ENST00000526066 TLE3Q04726 772 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 ERCC6LQ2NKX8 1250 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 TRIM69Q86WT6 500 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 SPATS2Q86XZ4 545 aaKnown RBP17.21■□□□□ 0.35
CCS-204ENST00000526066 LSMEM2Q8N112 164 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 DCBLD1Q8N8Z6 715 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 KLHDC7BQ96G42 594 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 IL22Q9GZX6 179 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 B4GALT6Q9UBX8 382 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 FADS3Q9Y5Q0 445 aa17.21■□□□□ 0.35
CCS-204ENST00000526066 NPIPB15A6NHN6 443 aaPredicted RBP17.2■□□□□ 0.34
CCS-204ENST00000526066 E7ESA3 106 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 EIF3HO15372 352 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCS-204ENST00000526066 TSPAN6O43657 245 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 MT-CO3P00414 261 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 TUBBP07437 444 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 ALPIP09923 528 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 PLA2G2AP14555 144 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 ZNF30P17039 623 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 ECHS1P30084 290 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 TMPRSS3P57727 454 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 TAS2R38P59533 333 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 CFHR1Q03591 330 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 RALGDSQ12967 914 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 LAMB3Q13751 1172 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 HLTFQ14527 1009 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCS-204ENST00000526066 HIF1AQ16665 826 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 CDKN3Q16667 212 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 TMEM52BQ4KMG9 183 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
CCS-204ENST00000526066 SPACA3Q8IXA5 215 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 RAVER1Q8IY67 606 aaKnown RBP17.2■□□□□ 0.34
CCS-204ENST00000526066 ZNF843Q8N446 348 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 BRSK1Q8TDC3 778 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 DEPDC7Q96QD5 511 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 RANBP9Q96S59 729 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 C19orf43Q9BQ61 176 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 MTRF1LQ9UGC7 380 aaKnown RBP17.2■□□□□ 0.34
CCS-204ENST00000526066 ZNF711Q9Y462 761 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 SPO11Q9Y5K1 396 aa17.2■□□□□ 0.34
CCS-204ENST00000526066 SDR42E2A6NKP2 422 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 ERVH48-1M5A8F1 160 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 SIGLEC6O43699 453 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 RNGTTO60942 597 aaKnown RBP17.19■□□□□ 0.34
CCS-204ENST00000526066 PRKCGP05129 697 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 TPH1P17752 444 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 MCM3P25205 808 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 SESN2P58004 480 aaPredicted RBP17.19■□□□□ 0.34
CCS-204ENST00000526066 PROX2Q3B8N5 592 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 FNBP1LQ5T0N5 605 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 CERCAMQ5T4B2 595 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 WDR93Q6P2C0 686 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 NEK5Q6P3R8 708 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 CRTC1Q6UUV9 634 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 CEP128Q6ZU80 1094 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 TTC30BQ8N4P2 665 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 BLOC1S5Q8TDH9 187 aa17.19■□□□□ 0.34
CCS-204ENST00000526066 PTCD2Q8WV60 388 aaKnown RBP17.19■□□□□ 0.34
CCS-204ENST00000526066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCS-204ENST00000526066 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms