RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TIPARPQ7Z3E1 657 aaKnown RBP23.75■■□□□ 1.39
USP47-205ENST00000525257 NLRP8Q86W28 1048 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 C9orf43Q8TAL5 461 aaPredicted RBP23.75■■□□□ 1.39
USP47-205ENST00000525257 TEKT4Q8WW24 435 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 STN1Q9H668 368 aaKnown RBP23.75■■□□□ 1.39
USP47-205ENST00000525257 SARS2Q9NP81 518 aaKnown RBP23.75■■□□□ 1.39
USP47-205ENST00000525257 KLHL3Q9UH77 587 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 KCNK6Q9Y257 313 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 CHKBQ9Y259 395 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 TTLL3Q9Y4R7 772 aa23.75■■□□□ 1.39
USP47-205ENST00000525257 MFSD11O43934 449 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 CLDN7O95471 211 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 MMRN1Q13201 1228 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 KRT81Q14533 505 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 BTBD6Q96KE9 485 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 ISCUQ9H1K1 167 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 VPS18Q9P253 973 aa23.74■■□□□ 1.39
USP47-205ENST00000525257 SNX2O60749 519 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 ACP5P13686 325 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 OAS2P29728 719 aaKnown RBP23.73■■□□□ 1.39
USP47-205ENST00000525257 MAN1A1P33908 653 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 CASRP41180 1078 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 SLC25A11Q02978 314 aaKnown RBP23.73■■□□□ 1.39
USP47-205ENST00000525257 PIGHQ14442 188 aaPredicted RBP23.73■■□□□ 1.39
USP47-205ENST00000525257 IGFBP7Q16270 282 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 IYDQ6PHW0 289 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 KDELC2Q7Z4H8 507 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 TDRD1Q9BXT4 1180 aaKnown RBP23.73■■□□□ 1.39
USP47-205ENST00000525257 FBXO8Q9NRD0 319 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 DNPEPQ9ULA0 475 aa23.73■■□□□ 1.39
USP47-205ENST00000525257 CNOT6Q9ULM6 557 aaKnown RBP23.73■■□□□ 1.39
USP47-205ENST00000525257 STK17BO94768 372 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 CD48P09326 243 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 GARSP41250 739 aaKnown RBP23.72■■□□□ 1.39
USP47-205ENST00000525257 DEFB109BQ30KR1 87 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 ALG1LQ6GMV1 187 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 SLC9B2Q86UD5 537 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 LRRC49Q8IUZ0 686 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 LPCAT1Q8NF37 534 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 STARD8Q92502 1023 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 SH3KBP1Q96B97 665 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 WDR24Q96S15 920 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 ZPBPQ9BS86 351 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 EFHD1Q9BUP0 239 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 ANKMY1Q9P2S6 941 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 ANAPC2Q9UJX6 822 aa23.72■■□□□ 1.39
USP47-205ENST00000525257 FADS2P1A8MWK0 482 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 IL4RP24394 825 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 ZNF165P49910 485 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 FOXK1P85037 733 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 ABHD18Q0P651 414 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 ATP1A1-AS1Q5TC04 95 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 MAML1Q92585 1016 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 RNF31Q96EP0 1072 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 HERPUD2Q9BSE4 406 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 TBC1D10AQ9BXI6 508 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 RBM22Q9NW64 420 aaKnown RBP eCLIP23.71■■□□□ 1.39
USP47-205ENST00000525257 ANAPC7Q9UJX3 599 aa23.71■■□□□ 1.39
USP47-205ENST00000525257 TMEM184BQ9Y519 407 aaPredicted RBP23.71■■□□□ 1.39
USP47-205ENST00000525257 SPENQ96T58 3664 aaKnown RBP23.7■■□□□ 1.38
USP47-205ENST00000525257 C1orf232A0A0U1RR37 186 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 A6NCN8 305 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 POLR1CO15160 346 aaPredicted RBP23.7■■□□□ 1.38
USP47-205ENST00000525257 PRLP01236 227 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 SSR1P43307 286 aaKnown RBP23.7■■□□□ 1.38
USP47-205ENST00000525257 EPHA4P54764 986 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 GALNT2Q10471 571 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 UBAP2LQ14157 1087 aaKnown RBP23.7■■□□□ 1.38
USP47-205ENST00000525257 CCDC122Q5T0U0 273 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 C16orf46Q6P387 395 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 LYSMD3Q7Z3D4 306 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 NIPA2Q8N8Q9 360 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 PCDH9Q9HC56 1237 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 RCOR3Q9P2K3 495 aaPredicted RBP23.7■■□□□ 1.38
USP47-205ENST00000525257 IP6K2Q9UHH9 426 aa23.7■■□□□ 1.38
USP47-205ENST00000525257 MATN3O15232 486 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 DLGAP3O95886 979 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 F3P13726 295 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 SLC2A4P14672 509 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 CA4P22748 312 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 CES1P23141 567 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 SPINT3P49223 89 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 TYRO3Q06418 890 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 NIPAL4Q0D2K0 466 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 FILIP1LQ4L180 1135 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 HENMT1Q5T8I9 393 aaKnown RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 NCBP2-AS2Q69YL0 99 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 TIGD7Q6NT04 549 aaPredicted RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 ARRDC2Q8TBH0 407 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 LRRN4Q8WUT4 740 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 APOBEC4Q8WW27 367 aaKnown RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 ABHD17AQ96GS6 310 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 THAP2Q9H0W7 228 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 TRIT1Q9H3H1 467 aaKnown RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 CPNE7Q9UBL6 633 aa23.69■■□□□ 1.38
USP47-205ENST00000525257 MRPS18BQ9Y676 258 aaKnown RBP23.69■■□□□ 1.38
USP47-205ENST00000525257 KIR2DS5A0A0G2JLQ3 304 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 A0A0G2JNG1 304 aa23.68■■□□□ 1.38
USP47-205ENST00000525257 KIR2DS3K7RE56 304 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms