RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 INPP5AQ14642 412 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 MORF4L2Q15014 288 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 EFTUD2Q15029 972 aaKnown RBP eCLIP6.45□□□□□ -1.38
CD44-214ENST00000525211 SHBQ15464 509 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 TCEA2Q15560 299 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ANKRD20A4Q4UJ75 823 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ATP13A5Q4VNC0 1218 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ZNF542PQ5EBM4 170 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 PSAPL1Q6NUJ1 521 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ERAP2Q6P179 960 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 C4orf22Q6V702 233 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 UNC5AQ6ZN44 842 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 CAPN12Q6ZSI9 719 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 CEP68Q76N32 757 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ASCL5Q7RTU5 278 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SFTPA2Q8IWL1 248 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ZCCHC9Q8N567 271 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 CADM4Q8NFZ8 388 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 UHMK1Q8TAS1 419 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 PIGKQ92643 395 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ZBTB9Q96C00 473 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 NUS1Q96E22 293 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 CFAP36Q96G28 342 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 CDKN2AIPNLQ96HQ2 116 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SERAC1Q96JX3 654 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ZC3H10Q96K80 434 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 C9orf72Q96LT7 481 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 RANBP9Q96S59 729 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 FERMT1Q9BQL6 677 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 KIFC1Q9BW19 673 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 BOCQ9BWV1 1114 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 TXLNGYQ9BZA5 131 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ARRDC1-AS1Q9H2J1 176 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 EPB41L4BQ9H329 900 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 IL21RQ9HBE5 538 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SAYSD1Q9NPB0 183 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 MRPL40Q9NQ50 206 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 NLE1Q9NVX2 485 aaPredicted RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 FEZ2Q9UHY8 353 aaPredicted RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 PILRBQ9UKJ0 227 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SOX13Q9UN79 622 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 TMEM98Q9Y2Y6 226 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 UTP11Q9Y3A2 253 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 PRKAB1Q9Y478 270 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 PCDHGA2Q9Y5H1 932 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 PCDHGA11Q9Y5H2 935 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 TEX264Q9Y6I9 313 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 PRSS21Q9Y6M0 314 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SPAG17Q6Q759 2223 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 OTOGLQ3ZCN5 2332 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 FRYLO94915 3013 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 A0A1B0GVT2 93 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 MEI4A8MW99 385 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 STX7O15400 261 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 OR1I1O60431 355 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 CELA2BP08218 269 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 MLNP12872 115 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LPOP22079 712 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 HNRNPA2B1P22626 353 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 TGM1P22735 817 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 CA4P22748 312 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ADRA1DP25100 572 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 CD27P26842 260 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 GABRB3P28472 473 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SSTR1P30872 391 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 HMGCLP35914 325 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 GMPRP36959 345 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SCTRP47872 440 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 NPY2RP49146 381 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 IRX4P78413 519 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ACVR1Q04771 509 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 EIF2B5Q13144 721 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 CBLBQ13191 982 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ARHGEF7Q14155 803 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LRRC14Q15048 493 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SF3A2Q15428 464 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 ELF2Q15723 593 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 GLE1Q53GS7 698 aaKnown RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 PCID2Q5JVF3 399 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LYSMD4Q5XG99 296 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 STEAP4Q687X5 459 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 KIAA1161Q6NSJ0 714 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 PNCKQ6P2M8 343 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 NEK5Q6P3R8 708 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 SLC36A4Q6YBV0 504 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 CCNI2Q6ZMN8 369 aaPredicted RBP6.44□□□□□ -1.38
CD44-214ENST00000525211 Q6ZSR6 202 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LPCAT2Q7L5N7 544 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ABI3BPQ7Z7G0 1075 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LINC00523Q86TU6 105 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 HOOK3Q86VS8 718 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 CCDC25Q86WR0 208 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 HEATR4Q86WZ0 1026 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 FBXO36Q8NEA4 188 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 ACVR1CQ8NER5 493 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 LKAAEAR1Q8TD35 194 aa6.44□□□□□ -1.38
CD44-214ENST00000525211 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms