RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MAGEE1Q9HCI5 957 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 KLHL8Q9P2G9 620 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-203ENST00000525013 CNOT6Q9ULM6 557 aaKnown RBP18.42■□□□□ 0.54
CAPN1-203ENST00000525013 PRKAB1Q9Y478 270 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 OAS3Q9Y6K5 1087 aaKnown RBP18.42■□□□□ 0.54
CAPN1-203ENST00000525013 ATRXP46100 2492 aa18.42■□□□□ 0.54
CAPN1-203ENST00000525013 RCCD1A6NED2 376 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 FADS2P1A8MWK0 482 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 F5H423 210 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-203ENST00000525013 AGRPO00253 132 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 MTSS1O43312 755 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 NDST3O95803 873 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 TNNT3P45378 269 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-203ENST00000525013 WASHC5Q12768 1159 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 SLC14A2Q15849 920 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 IGF2-ASQ6U949 168 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 RAB11FIP2Q7L804 512 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 KCNE4Q8WWG9 221 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 TADA1Q96BN2 335 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 EID2BQ96D98 161 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 PRR11Q96HE9 360 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-203ENST00000525013 VPS18Q9P253 973 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 ZNF711Q9Y462 761 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 DUSP10Q9Y6W6 482 aa18.41■□□□□ 0.54
CAPN1-203ENST00000525013 TRBV23OR9-2A0A075B6M9 112 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 PLD2O14939 933 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 ZW10O43264 779 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 B4GAT1O43505 415 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 NFKB1P19838 968 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 CD68P34810 354 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-203ENST00000525013 B4GALNT1Q00973 533 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 TLE3Q04726 772 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 EIF3IQ13347 325 aaKnown RBP18.4■□□□□ 0.54
CAPN1-203ENST00000525013 LRP8Q14114 963 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 PHF19Q5T6S3 580 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 CHST15Q7LFX5 561 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-203ENST00000525013 PID1Q7Z2X4 250 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 C17orf82Q86X59 251 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-203ENST00000525013 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 NAGSQ8N159 534 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 RDH14Q9HBH5 336 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 RAD18Q9NS91 495 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 FAM153AQ9UHL3 310 aa18.4■□□□□ 0.54
CAPN1-203ENST00000525013 SCN8AQ9UQD0 1980 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 MACROD2A1Z1Q3 448 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 H7C0C1 242 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 KLK10O43240 276 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 DNAJC6O75061 913 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 HGFP14210 728 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 CCKBRP32239 447 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 UGT1A5P35504 534 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ATP5OP48047 213 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 WNT3AP56704 352 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 PPP2R5EQ16537 467 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF569Q5MCW4 686 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 BROXQ5VW32 411 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 RAD9BQ6WBX8 426 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 BBS12Q6ZW61 710 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 USP53Q70EK8 1073 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF438Q7Z4V0 828 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 TMC3Q7Z5M5 1100 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 PIM3Q86V86 326 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 JAMLQ86YT9 394 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF567Q8N184 647 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 GPR26Q8NDV2 337 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ACRBPQ8NEB7 543 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 HTR3CQ8WXA8 447 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 FCRL3Q96P31 734 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 QKIQ96PU8 341 aaKnown RBP eCLIP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 SRPK1Q96SB4 655 aaKnown RBP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 VAT1Q99536 393 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 ZSCAN5AQ9BUG6 496 aa18.39■□□□□ 0.53
CAPN1-203ENST00000525013 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 PCYT1BQ9Y5K3 369 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-203ENST00000525013 MGAQ8IWI9 3026 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 CDRT15L2A8MXV6 281 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 HACD1B0YJ81 288 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 SLC25A14O95258 325 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 CPNE6O95741 557 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 ITGA2BP08514 1039 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 JMJD7P0C870 316 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 ACP5P13686 325 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 HOXB3P14651 431 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 FECHP22830 423 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 CTNNA1P35221 906 aaKnown RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 MLLT3P42568 568 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 PPM1FP49593 454 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 COPS2P61201 443 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 ZNF648Q5T619 568 aaPredicted RBP18.38■□□□□ 0.53
CAPN1-203ENST00000525013 KIAA1328Q86T90 577 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 SLC25A41Q8N5S1 370 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 LACRTQ9GZZ8 138 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 OR2AG1Q9H205 316 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 PRORYQ9H606 182 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 RMI1Q9H9A7 625 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 WDR70Q9NW82 654 aa18.38■□□□□ 0.53
CAPN1-203ENST00000525013 PISDQ9UG56 409 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms