RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 TUBA4AP68366 448 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 NTHL1P78549 312 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ZBTB17Q13105 803 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 LRP8Q14114 963 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 SQLEQ14534 574 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 C6orf10Q5SRN2 563 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CERCAMQ5T4B2 595 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 C9orf57Q5W0N0 161 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TMEM198Q66K66 360 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 RSPO2Q6UXX9 243 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GK5Q6ZS86 529 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ANKS3Q6ZW76 656 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 RTL10Q7L3V2 364 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GET4Q7L5D6 327 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PID1Q7Z2X4 250 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ATCAYQ86WG3 371 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MFSD6LQ8IWD5 586 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 LZTR1Q8N653 840 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 NPWQ8N729 165 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ANKFN1Q8N957 763 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ST13P5Q8NFI4 369 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 BEST2Q8NFU1 509 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 HM13Q8TCT9 377 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ADAMTS16Q8TE57 1224 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MFSD3Q96ES6 412 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 PGAP3Q96FM1 320 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 DNAJC1Q96KC8 554 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CNBD2Q96M20 576 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 HNRNPABQ99729 332 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 RTP3Q9BQQ7 232 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 OSBPL11Q9BXB4 747 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 NUF2Q9BZD4 464 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 OSBPL2Q9H1P3 480 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 SUDS3Q9H7L9 328 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 EFCAB1Q9HAE3 211 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 GOLGA2P5Q9HBQ8 144 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MRPL40Q9NQ50 206 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 IARS2Q9NSE4 1012 aaKnown RBP7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MRGBPQ9NV56 204 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 MTRRQ9UBK8 725 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 FBXW11Q9UKB1 542 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 TRHDEQ9UKU6 1024 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 BACE2Q9Y5Z0 518 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 KIAA1671Q9BY89 1806 aa7.82□□□□□ -1.16
SPIDR-223ENST00000524033 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 TRIM64BA6NI03 449 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 TRPC5OSA6NMA1 111 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 STX16-NPEPL1H3BU86 382 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF701M0R085 212 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 AP3B1O00203 1094 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 EEF2KO00418 725 aaKnown RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 NEMP1O14524 444 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 NCAM2O15394 837 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 WISP3O95389 354 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 FYNP06241 537 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 FAM163BP0C2L3 166 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 EPB42P16452 691 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PSMC3P17980 439 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 NFKB1P19838 968 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ARNTP27540 789 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 SLC7A1P30825 629 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 RANBP1P43487 201 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ABCG1P45844 678 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 BRCC3P46736 316 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF135P52742 658 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PSME3P61289 254 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PFKPQ01813 784 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 RHDQ02161 417 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF33AQ06730 810 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 SOX4Q06945 474 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 SLC12A1Q13621 1099 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 HTR4Q13639 388 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 MAPRE2Q15555 327 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 SMAD1Q15797 465 aaKnown RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 KCTD21Q4G0X4 260 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 TECRLQ5HYJ1 363 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ARTNQ5T4W7 220 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 IL23RQ5VWK5 629 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 REP15Q6BDI9 236 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ITPRIPL1Q6GPH6 555 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 FAM45BPQ6NSW5 357 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PARM1Q6UWI2 310 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 CD300LGQ6UXG3 332 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PAQR9Q6ZVX9 377 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 BHLHA9Q7RTU4 235 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 AMIGO2Q86SJ2 522 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 PIGZQ86VD9 579 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ERI1Q8IV48 349 aaKnown RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 SLC41A1Q8IVJ1 513 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ETFBKMTQ8IXQ9 262 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 FSTL5Q8N475 847 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 MFSD2AQ8NA29 543 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 DTWD2Q8NBA8 298 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 TXNDC5Q8NBS9 432 aaKnown RBP7.81□□□□□ -1.16
SPIDR-223ENST00000524033 NETO2Q8NC67 525 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 C3orf58Q8NDZ4 430 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 OR6B3Q8NGW1 331 aa7.81□□□□□ -1.16
SPIDR-223ENST00000524033 ZNF461Q8TAF7 563 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms